RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 RECQLP46063 649 aaPredicted RBP12.03□□□□□ -0.48
LITAF-221ENST00000622633 GATMP50440 423 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 PRKCDQ05655 676 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 NR6A1Q15406 480 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 IMPG1Q17R60 797 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 TPRG1LQ5T0D9 272 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 P2RY8Q86VZ1 359 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 OR8H3Q8N146 312 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 TMCO6Q96DC7 493 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 SPATA9Q9BWV2 254 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.03□□□□□ -0.483e-7■■□□□ 13.1
LITAF-221ENST00000622633 TMEM245Q9H330 911 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 ESRP2Q9H6T0 727 aaKnown RBP12.03□□□□□ -0.48
LITAF-221ENST00000622633 ING3Q9NXR8 418 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 ZNF639Q9UID6 485 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 VPS9D1Q9Y2B5 631 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 PCDHB3Q9Y5E6 796 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 PCDHGA2Q9Y5H1 932 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 GREB1Q4ZG55 1949 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 PIPSLA2A3N6 862 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 PMS2P1A4D2B8 440 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 SLC38A8A6NNN8 435 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 OR7A17O14581 309 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 TLL1O43897 1013 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 C1QBP02746 253 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 FTH1P02794 183 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 KLKB1P03952 638 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 ITGB6P18564 788 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 PSMA3P25788 255 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 GPC1P35052 558 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 ATP5C1P36542 298 aaKnown RBP12.03□□□□□ -0.48
LITAF-221ENST00000622633 SLC11A2P49281 568 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 FAM189BP81408 668 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 GPR17Q13304 367 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 AP5B1Q2VPB7 878 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 RFTN2Q52LD8 501 aaPredicted RBP12.03□□□□□ -0.48
LITAF-221ENST00000622633 BEND4Q6ZU67 534 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 GOLGA7Q7Z5G4 137 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 DPP10Q8N608 796 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 OR4F6Q8NGB9 312 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 DNAJA4Q8WW22 397 aaPredicted RBP12.03□□□□□ -0.48
LITAF-221ENST00000622633 LGALS12Q96DT0 336 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 RRAGCQ9HB90 399 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 HEBP1Q9NRV9 189 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 GKN1Q9NS71 199 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 NAALAD2Q9Y3Q0 740 aa12.03□□□□□ -0.48
LITAF-221ENST00000622633 POLR3HQ9Y535 204 aaPredicted RBP12.03□□□□□ -0.48
LITAF-221ENST00000622633 TNPO3Q9Y5L0 923 aaKnown RBP12.03□□□□□ -0.48
LITAF-221ENST00000622633 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.02□□□□□ -0.48
LITAF-221ENST00000622633 UPK1AO00322 258 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 PRAMEF12O95522 483 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 FABP1P07148 127 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 TCF3P15923 654 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 CLCN7P51798 805 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 ZNF177Q13360 481 aaPredicted RBP12.02□□□□□ -0.48
LITAF-221ENST00000622633 ABRAXAS2Q15018 415 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 MPP7Q5T2T1 576 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 FAM126BQ8IXS8 530 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 GANCQ8TET4 914 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 KCNJ9Q92806 393 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 RPL3LQ92901 407 aaKnown RBP12.02□□□□□ -0.48
LITAF-221ENST00000622633 TMBIM1Q969X1 311 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 TRMT61AQ96FX7 289 aaKnown RBP12.02□□□□□ -0.48
LITAF-221ENST00000622633 OR2A14Q96R47 310 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 MNTQ99583 582 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 NPAS1Q99742 590 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 ADGRE3Q9BY15 652 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 C6orf62Q9GZU0 229 aaPredicted RBP12.02□□□□□ -0.48
LITAF-221ENST00000622633 TNKS2Q9H2K2 1166 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 UCK1Q9HA47 277 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 C14orf119Q9NWQ9 140 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 MAGEL2Q9UJ55 1249 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 RAB23Q9ULC3 237 aa12.02□□□□□ -0.48
LITAF-221ENST00000622633 BTN3A3O00478 584 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 DFNA5O60443 496 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 GUCA1CO95843 209 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 CCNYL3P0C7X3 344 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 SLC2A4P14672 509 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 PIK3CGP48736 1102 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 GABARAPL2P60520 117 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 EMX1Q04741 257 aaPredicted RBP12.02□□□□□ -0.49
LITAF-221ENST00000622633 IRF3Q14653 427 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 POU4F3Q15319 338 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 ZMAT1Q5H9K5 638 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 RNF219Q5W0B1 726 aaPredicted RBP12.02□□□□□ -0.49
LITAF-221ENST00000622633 TAS1R1Q7RTX1 841 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 PLD3Q8IV08 490 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 FAM86B1Q8N7N1 296 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 ITFG1Q8TB96 612 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 SLC19A3Q9BZV2 496 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 CARS2Q9HA77 564 aaKnown RBP12.02□□□□□ -0.49
LITAF-221ENST00000622633 NUDT4Q9NZJ9 180 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 PDE10AQ9Y233 779 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 SLC22A7Q9Y694 548 aa12.02□□□□□ -0.49
LITAF-221ENST00000622633 ANKRD36A6QL64 1941 aa12.01□□□□□ -0.49
LITAF-221ENST00000622633 SCAMP3O14828 347 aaKnown RBP12.01□□□□□ -0.49
LITAF-221ENST00000622633 TFECO14948 347 aaPredicted RBP12.01□□□□□ -0.49
LITAF-221ENST00000622633 ANKRD28O15084 1053 aa12.01□□□□□ -0.49
LITAF-221ENST00000622633 ANXA6P08133 673 aa12.01□□□□□ -0.49
LITAF-221ENST00000622633 CSKP41240 450 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms