RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 PCDH7O60245 1069 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 KIF5CO60282 957 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 GRAP2O75791 330 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 CDC123O75794 336 aaPredicted RBP4.35□□□□□ -1.71
CPNE3-213ENST00000622183 IGLV2-11P01706 119 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 SLC2A2P11168 524 aaPredicted RBP4.35□□□□□ -1.71
CPNE3-213ENST00000622183 LBX1P52954 281 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 OR1D5P58170 312 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 KCNJ10P78508 379 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 SLC3A1Q07837 685 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 SRSF9Q13242 221 aaKnown RBP eCLIP4.35□□□□□ -1.71
CPNE3-213ENST00000622183 SGCGQ13326 291 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 TEAD2Q15562 447 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 ZNF74Q16587 644 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 GTDC1Q4AE62 458 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 FGD3Q5JSP0 725 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 CNSTQ6PJW8 725 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 SLC25A47Q6Q0C1 308 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 DHRS11Q6UWP2 260 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 SMYD1Q8NB12 490 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 GGHQ92820 318 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 LGALS12Q96DT0 336 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 SPXQ9BT56 116 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 ZDHHC6Q9H6R6 413 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 ANO10Q9NW15 660 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 TRMT6Q9UJA5 497 aaKnown RBP4.35□□□□□ -1.71
CPNE3-213ENST00000622183 FOXA2Q9Y261 457 aaPredicted RBP4.35□□□□□ -1.71
CPNE3-213ENST00000622183 EXOC6BQ9Y2D4 811 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 TDRKHQ9Y2W6 561 aaKnown RBP4.35□□□□□ -1.71
CPNE3-213ENST00000622183 TMED7Q9Y3B3 224 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 C2CD2Q9Y426 696 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 COLEC10Q9Y6Z7 277 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 SLC9B1P1A6NJY1 282 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 PMS2P5A8MQ11 134 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 FAM72CH0Y354 149 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 CLN5O75503 358 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 TRMUO75648 421 aaKnown RBP4.34□□□□□ -1.71
CPNE3-213ENST00000622183 AP2A2O94973 939 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 ABHD2P08910 425 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 PRSS56P0CW18 603 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 ANOS1P23352 680 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 CLCN4P51793 760 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 NR0B1P51843 470 aaKnown RBP4.34□□□□□ -1.71
CPNE3-213ENST00000622183 SMSP52788 366 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 STARD6P59095 220 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 PDE7AQ13946 482 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 PARP10Q53GL7 1025 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 FAM72AQ5TYM5 149 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 FAM72DQ6L9T8 149 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 PSRC1Q6PGN9 363 aaPredicted RBP4.34□□□□□ -1.71
CPNE3-213ENST00000622183 TOM1L2Q6ZVM7 507 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 FAM72BQ86X60 149 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 DCUN1D3Q8IWE4 304 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 CNBD1Q8NA66 436 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 GPRC5AQ8NFJ5 357 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 OR5AP2Q8NGF4 316 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 GATAD1Q8WUU5 269 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 ZNRF4Q8WWF5 429 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 FAM46BQ96A09 425 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 NXPE2Q96DL1 559 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 TMEM237Q96Q45 408 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 PRAM1Q96QH2 718 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 NKX3-1Q99801 234 aaPredicted RBP4.34□□□□□ -1.71
CPNE3-213ENST00000622183 TNMDQ9H2S6 317 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 ZNF71Q9NQZ8 489 aaPredicted RBP4.34□□□□□ -1.71
CPNE3-213ENST00000622183 EPHA6Q9UF33 1036 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 KCNK6Q9Y257 313 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 NCKAP1Q9Y2A7 1128 aa4.34□□□□□ -1.71
CPNE3-213ENST00000622183 NPHP3Q7Z494 1330 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 IGHV4-4A0A075B6R2 117 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 TRBV4-1A0A0J9YWV2 114 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 C2orf92A0A1B0GVN3 265 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 GTPBP10A4D1E9 387 aaKnown RBP4.33□□□□□ -1.72
CPNE3-213ENST00000622183 A8MVM7 634 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 KHDRBS3O75525 346 aaKnown RBP4.33□□□□□ -1.72
CPNE3-213ENST00000622183 PRDM1O75626 825 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 SEC24AO95486 1093 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 MT-ND2P03891 347 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 CD48P09326 243 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 CPA3P15088 417 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 RPL35AP18077 110 aaKnown RBP4.33□□□□□ -1.72
CPNE3-213ENST00000622183 SLC12A3P55017 1021 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 DCDC1P59894 354 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 GFPT1Q06210 699 aaPredicted RBP4.33□□□□□ -1.72
CPNE3-213ENST00000622183 LCP2Q13094 533 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 GRB14Q14449 540 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 PTPN14Q15678 1187 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 C9orf50Q5SZB4 431 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 FAM53AQ6NSI3 398 aaPredicted RBP4.33□□□□□ -1.72
CPNE3-213ENST00000622183 SLC27A4Q6P1M0 643 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 MACC1Q6ZN28 852 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 C15orf52Q6ZUT6 534 aaKnown RBP4.33□□□□□ -1.72
CPNE3-213ENST00000622183 BTN2A1Q7KYR7 527 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 C5orf24Q7Z6I8 188 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 APLFQ8IW19 511 aaPredicted RBP4.33□□□□□ -1.72
CPNE3-213ENST00000622183 ZC3H3Q8IXZ2 948 aaKnown RBP4.33□□□□□ -1.72
CPNE3-213ENST00000622183 ZNF444Q8N0Y2 327 aaPredicted RBP4.33□□□□□ -1.72
CPNE3-213ENST00000622183 LSMEM2Q8N112 164 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 RNF149Q8NC42 400 aa4.33□□□□□ -1.72
CPNE3-213ENST00000622183 OR10G8Q8NGN5 311 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms