RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 IFT80Q9P2H3 777 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-245ENST00000621399 CDC14AQ9UNH5 594 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 MRPS2Q9Y399 296 aaKnown RBP17.68■□□□□ 0.42
CIRBP-245ENST00000621399 HEATR5BQ9P2D3 2071 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 URB1O60287 2271 aaKnown RBP17.67■□□□□ 0.42
CIRBP-245ENST00000621399 C21orf140B9A014 251 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 C9J4A7 227 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 UGDHO60701 494 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 PIM1P11309 404 aaPredicted RBP17.67■□□□□ 0.42
CIRBP-245ENST00000621399 PCNAP12004 261 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 OR1D4P47884 311 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 RPS15P62841 145 aaKnown RBP17.67■□□□□ 0.42
CIRBP-245ENST00000621399 CLCQ05315 142 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 DNASE1L3Q13609 305 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 FAM53BQ14153 422 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 MLIPQ5VWP3 458 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 PRMT9Q6P2P2 845 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 MILR1Q7Z6M3 343 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 CREB3L4Q8TEY5 395 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.67■□□□□ 0.42
CIRBP-245ENST00000621399 COL26A1Q96A83 441 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 MVB12AQ96EY5 273 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 NTMT1Q9BV86 223 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 RHBGQ9H310 441 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 TMBIM4Q9HC24 238 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 ZNF304Q9HCX3 659 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 SSU72Q9NP77 194 aaKnown RBP17.67■□□□□ 0.42
CIRBP-245ENST00000621399 OXSMQ9NWU1 459 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 GPN3Q9UHW5 284 aaPredicted RBP17.67■□□□□ 0.42
CIRBP-245ENST00000621399 KCND3Q9UK17 655 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 SSUH2Q9Y2M2 353 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 RNF11Q9Y3C5 154 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 ACTL7BQ9Y614 415 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 MAU2Q9Y6X3 613 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 CELSR3Q9NYQ7 3312 aa17.67■□□□□ 0.42
CIRBP-245ENST00000621399 SPTBP11277 2137 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 A0A0A6YYC8 382 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-245ENST00000621399 I3L1I5 382 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-245ENST00000621399 TERTO14746 1132 aaKnown RBP17.66■□□□□ 0.42
CIRBP-245ENST00000621399 CLEC3AO75596 197 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 OTCP00480 354 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 SERPINA6P08185 405 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 ITGAXP20702 1163 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 F8A1P23610 371 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 AVPR1BP47901 424 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 NAGLUP54802 743 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 UCNP55089 124 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 DNAJB13P59910 316 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 CPSF6Q16630 551 aaKnown RBP eCLIP17.66■□□□□ 0.42
CIRBP-245ENST00000621399 CFAP157Q5JU67 520 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 ARHGAP40Q5TG30 622 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 ADNP2Q6IQ32 1131 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 CCDC81Q6ZN84 652 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 C10orf107Q8IVU9 208 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 LAS2Q8IYD9 372 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 L3MBTL4Q8NA19 623 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 OR7G3Q8NG95 312 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 REPS1Q96D71 796 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 MMABQ96EY8 250 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-245ENST00000621399 GPR87Q9BY21 358 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 SLC6A16Q9GZN6 736 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 ANKHQ9HCJ1 492 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 KCNK9Q9NPC2 374 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 SLC22A11Q9NSA0 550 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 IL17BQ9UHF5 180 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 FARSAQ9Y285 508 aaKnown RBP17.66■□□□□ 0.42
CIRBP-245ENST00000621399 PCDHGA11Q9Y5H2 935 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 SLC22A7Q9Y694 548 aa17.66■□□□□ 0.42
CIRBP-245ENST00000621399 URADA6NGE7 173 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 AGPSO00116 658 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 PPP6CO00743 305 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 PRPF4O43172 522 aaKnown RBP eCLIP17.65■□□□□ 0.42
CIRBP-245ENST00000621399 EFSO43281 561 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 FOXS1O43638 330 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 MLYCDO95822 493 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 CAPN1P07384 714 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 RAB40ALP0C0E4 278 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 PTPN4P29074 926 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 SERPINB1P30740 379 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 TMPRSS3P57727 454 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 STXBP1P61764 594 aaKnown RBP17.65■□□□□ 0.42
CIRBP-245ENST00000621399 SNRPNP63162 240 aaKnown RBP17.65■□□□□ 0.42
CIRBP-245ENST00000621399 HYAL2Q12891 473 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 TRAF3Q13114 568 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 PCLAFQ15004 111 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 NCF4Q15080 339 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 TOR1AIP1Q5JTV8 583 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 LIPMQ5VYY2 423 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 FAM198BQ6UWH4 519 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 ABHD13Q7L211 337 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 VN1R5Q7Z5H4 357 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 ENDOVQ8N8Q3 282 aaKnown RBP17.65■□□□□ 0.42
CIRBP-245ENST00000621399 OR4F6Q8NGB9 312 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 OR9A4Q8NGU2 314 aa17.65■□□□□ 0.42
CIRBP-245ENST00000621399 MAGEB10Q96LZ2 347 aaPredicted RBP17.65■□□□□ 0.42
CIRBP-245ENST00000621399 H0YIV9 168 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 ONECUT2O95948 504 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 CD63P08962 238 aa17.64■□□□□ 0.41
CIRBP-245ENST00000621399 ZNF888P0CJ79 500 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-245ENST00000621399 ALOX12P18054 663 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms