RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 PPP1R3AQ16821 1122 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 ZXDCQ2QGD7 858 aaPredicted RBP9.13□□□□□ -0.95
TARDBP-218ENST00000617172 BTBD16Q32M84 506 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 H3F3CQ6NXT2 135 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 NXPE4Q6UWF7 544 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 SBSNQ6UWP8 590 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 PRSS41Q7RTY9 318 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 MAMDC2Q7Z304 686 aaPredicted RBP9.13□□□□□ -0.95
TARDBP-218ENST00000617172 ADAMTSL2Q86TH1 951 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 THOC6Q86W42 341 aaKnown RBP9.13□□□□□ -0.95
TARDBP-218ENST00000617172 ANKMY2Q8IV38 441 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 ZBED8Q8IZ13 594 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 AFAP1L2Q8N4X5 818 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 ZNF740Q8NDX6 193 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 ZCCHC10Q8TBK6 192 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 M1APQ8TC57 530 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 NT5CQ8TCD5 201 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 PYROXD1Q8WU10 500 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 CDKL2Q92772 493 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 NEIL2Q969S2 332 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 TBC1D20Q96BZ9 403 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 PDLIM2Q96JY6 352 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 KRT12Q99456 494 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 LPAR4Q99677 370 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 SLX1AQ9BQ83 275 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 ERP44Q9BS26 406 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 TRIM51Q9BSJ1 452 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 TRIM31Q9BZY9 425 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 RHOJQ9H4E5 214 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 OLAHQ9NV23 265 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 PLA2G3Q9NZ20 509 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 HCN3Q9P1Z3 774 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 WHRNQ9P202 907 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 ABI3Q9P2A4 366 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 TXNDC16Q9P2K2 825 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 SLC17A6Q9P2U8 582 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 CTNNAL1Q9UBT7 734 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 OARD1Q9Y530 152 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 PCDHGB6Q9Y5F9 930 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 PCM1Q15154 2024 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 CCDC88CQ9P219 2028 aa9.13□□□□□ -0.95
TARDBP-218ENST00000617172 SHANK1Q9Y566 2161 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 OR5H15A6NDH6 313 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 A8MUI8 341 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 TP73O15350 636 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 RDH16O75452 317 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 SEC24DO94855 1032 aaPredicted RBP9.12□□□□□ -0.95
TARDBP-218ENST00000617172 WDPCPO95876 746 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 SERPIND1P05546 499 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 FHP07954 510 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 SERPINA6P08185 405 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 GSTA2P09210 222 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 GNAZP19086 355 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 GSTM2P28161 218 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 HPDP32754 393 aaPredicted RBP9.12□□□□□ -0.95
TARDBP-218ENST00000617172 RPL21P46778 160 aaKnown RBP9.12□□□□□ -0.95
TARDBP-218ENST00000617172 TAS2R39P59534 338 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 TAS2R50P59544 299 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 ABRAXAS2Q15018 415 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.12□□□□□ -0.953e-6■■■■□ 22.6
TARDBP-218ENST00000617172 DEFB134Q4QY38 66 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 CDKL4Q5MAI5 379 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 ACER2Q5QJU3 275 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 CATSPEREQ5SY80 951 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 ZNF324BQ6AW86 544 aaPredicted RBP9.12□□□□□ -0.95
TARDBP-218ENST00000617172 TMEM207Q6UWW9 146 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 FRA10AC1Q70Z53 315 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 ANKRD37Q7Z713 158 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 PDSS2Q86YH6 399 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 SLC5A8Q8N695 610 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 HORMAD2Q8N7B1 307 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 TTLQ8NG68 377 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 TSPAN17Q96FV3 270 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 PEX11GQ96HA9 241 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 SEC16BQ96JE7 1060 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 MAGEB10Q96LZ2 347 aaPredicted RBP9.12□□□□□ -0.95
TARDBP-218ENST00000617172 EGFL8Q99944 293 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 WDR83Q9BRX9 315 aaKnown RBP9.12□□□□□ -0.95
TARDBP-218ENST00000617172 PITHD1Q9GZP4 211 aaPredicted RBP9.12□□□□□ -0.95
TARDBP-218ENST00000617172 DERL2Q9GZP9 239 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 KCNK13Q9HB14 408 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 GPAMQ9HCL2 828 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 MMP25Q9NPA2 562 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 LANCL2Q9NS86 450 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 SLC22A14Q9Y267 594 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 SNX24Q9Y343 169 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 PSAT1Q9Y617 370 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 NAV2Q8IVL1 2488 aa9.12□□□□□ -0.95
TARDBP-218ENST00000617172 CDC7O00311 574 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 E2F3O00716 465 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 LRRTM2O43300 516 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 CHST10O43529 356 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 PRMT3O60678 531 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 PRAMEF2O60811 474 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 RASAL1O95294 804 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 MLYCDO95822 493 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 CELA2AP08217 269 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 STSP08842 583 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 EFNA3P52797 238 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 PGGT1BP53609 377 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms