RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 COMMD3Q9UBI1 195 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 PSORS1C1Q9UIG5 152 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 WDR90Q96KV7 1748 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 CDRT1O95170 752 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 TP53P04637 393 aaPredicted RBP12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 CDK1P06493 297 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 GNPDA1P46926 289 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 ZNF140P52738 457 aaPredicted RBP12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 CAV3P56539 151 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 FAM110CQ1W6H9 321 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 ZC3H12BQ5HYM0 836 aaKnown RBP12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 AFMIDQ63HM1 303 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 CD300LGQ6UXG3 332 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 OTOP2Q7RTS6 562 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 ADGRG2Q8IZP9 1017 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 OR6C4Q8NGE1 309 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 MAL2Q969L2 176 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 SLC39A13Q96H72 371 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 PDLIM5Q96HC4 596 aaKnown RBP12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 COL21A1Q96P44 957 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 PANX1Q96RD7 426 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 MCCC1Q96RQ3 725 aaPredicted RBP12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 GON7Q9BXV9 100 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 B4DXG7 233 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 ATP6V1G2-DDX39BF2Z307 99 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 HAS3O00219 553 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 GPX5O75715 221 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 WISP3O95389 354 aaPredicted RBP12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 CD72P21854 359 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 PKLRP30613 574 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 DNAJC22Q8N4W6 341 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 B3GNT7Q8NFL0 401 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 OR9Q1Q8NGQ5 310 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 ANGPTL6Q8NI99 470 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 SUSD3Q96L08 255 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 PPP3R2Q96LZ3 170 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 CCDC32Q9BV29 185 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 RLIMQ9NVW2 624 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 ELOVL2Q9NXB9 296 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 ING3Q9NXR8 418 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 PRSS21Q9Y6M0 314 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 RETP07949 1114 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 POLR2CP19387 275 aaPredicted RBP12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 CDH12P55289 794 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 ZMYND11Q15326 602 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 USP39Q53GS9 565 aaKnown RBP12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 FAM180BQ6P0A1 224 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 GPR62Q9BZJ7 368 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 FKBP14Q9NWM8 211 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 SCML2Q9UQR0 700 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 PCDHGB2Q9Y5G2 931 aa12.94□□□□□ -0.34
PCDHA11-202ENST00000616325 BRCA1P38398 1863 aaKnown RBP12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 A0A0U1RQF3 1178 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 A0A1W2PQL4 384 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 PDGFAP04085 211 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 CLEC2LP0C7M8 214 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 SDHBP21912 280 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 HOXD9P28356 352 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 KIR2DL3P43628 341 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 TAF1AQ15573 450 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 TRIQKQ629K1 86 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 ZNF57Q68EA5 555 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 ZNF467Q7Z7K2 595 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 SLC5A8Q8N695 610 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 C1orf74Q96LT6 269 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 ZNF382Q96SR6 550 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 MTERF1Q99551 399 aaKnown RBP12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 ADGRE3Q9BY15 652 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 CD84Q9UIB8 345 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 TNFRSF11BO00300 401 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 SERPINI2O75830 405 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 PRLP01236 227 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 RORCP51449 518 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 TBCEQ15813 527 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 GET4Q7L5D6 327 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 ZSWIM9Q86XI8 627 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 VWA5B2Q8N398 1253 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 GPR156Q8NFN8 814 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 RNF170Q96K19 258 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 CCDC115Q96NT0 180 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 GLTPQ9NZD2 209 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 ZNF222Q9UK12 451 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 RWDD3Q9Y3V2 267 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 LEUTXA8MZ59 168 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 HNRNPCL2B2RXH8 293 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 LZTS3O60299 673 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 CLDN7O95471 211 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 GBAP04062 536 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 BCKDHAP12694 445 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 EPB42P16452 691 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 ENGP17813 658 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 DDCP20711 480 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 FEN1P39748 380 aaKnown RBP12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 MAGEA11P43364 429 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 MAN2A2P49641 1150 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 RGS4P49798 205 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 CCL23P55773 120 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 HNRNPA0Q13151 305 aaKnown RBP12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 STK11Q15831 433 aa12.93□□□□□ -0.34
PCDHA11-202ENST00000616325 TIMM50Q3ZCQ8 353 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms