RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 HBA1P69905 142 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 MXD1Q05195 221 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 ZNF385BQ569K4 471 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.54□□□□□ -0.24
COL6A1-207ENST00000612273 TPRG1LQ5T0D9 272 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 AGTRAPQ6RW13 159 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.54□□□□□ -0.24
COL6A1-207ENST00000612273 CBLL1Q75N03 491 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 PRSS48Q7RTY5 328 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 HSD11B1LQ7Z5J1 315 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 FAM124AQ86V42 546 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 CACUL1Q86Y37 369 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 RHOXF1Q8NHV9 184 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 HUS1BQ8NHY5 278 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 CSGALNACT1Q8TDX6 532 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 GGHQ92820 318 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 C11orf16Q9NQ32 467 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 MS4A12Q9NXJ0 267 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 B3GNT3Q9Y2A9 372 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 PRKAB1Q9Y478 270 aa13.54□□□□□ -0.24
COL6A1-207ENST00000612273 H3BM21 787 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 APOL3O95236 402 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 S100A5P33763 92 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 EPHB3P54753 998 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 RGNQ15493 299 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 PROX2Q3B8N5 592 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 GAREM2Q75VX8 874 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 SERPINA11Q86U17 422 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 TMEM25Q86YD3 366 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 OR8H2Q8N162 312 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 ZNF740Q8NDX6 193 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 VANGL1Q8TAA9 524 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-207ENST00000612273 CD99L2Q8TCZ2 262 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 ZNF675Q8TD23 568 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 SLC38A4Q969I6 547 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 TESCQ96BS2 214 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 IGSF21Q96ID5 467 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 WRAP53Q9BUR4 548 aaKnown RBP13.53□□□□□ -0.24
COL6A1-207ENST00000612273 NAALAD2Q9Y3Q0 740 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 AOC2O75106 756 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 CHI3L1P36222 383 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-207ENST00000612273 HNF4AP41235 474 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 KCNJ10P78508 379 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 SELENBP1Q13228 472 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 IL18R1Q13478 541 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 OLIG3Q7RTU3 272 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 LRRC70Q7Z2Q7 622 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 ARMC8Q8IUR7 673 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 VPS37AQ8NEZ2 397 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 TMEM159Q96B96 161 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 OR4K3Q96R72 315 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 CCM2Q9BSQ5 444 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 BTBD2Q9BX70 525 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 RDH14Q9HBH5 336 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 TMEM45AQ9NWC5 275 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 NDUFAF4Q9P032 175 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 PCDHB11Q9Y5F2 797 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 CCDC88CQ9P219 2028 aa13.53□□□□□ -0.24
COL6A1-207ENST00000612273 COL4A4P53420 1690 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-207ENST00000612273 TFECO14948 347 aaPredicted RBP13.52□□□□□ -0.24
COL6A1-207ENST00000612273 JUPP14923 745 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 GPX2P18283 190 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 PSMA3P25788 255 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 SRSF11Q05519 484 aaKnown RBP13.52□□□□□ -0.24
COL6A1-207ENST00000612273 KEAP1Q14145 624 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 SF3B4Q15427 424 aaKnown RBP eCLIP13.52□□□□□ -0.24
COL6A1-207ENST00000612273 DESI1Q6ICB0 168 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 MEX3DQ86XN8 651 aaKnown RBP13.52□□□□□ -0.24
COL6A1-207ENST00000612273 RNF130Q86XS8 419 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 GATAD2AQ86YP4 633 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 TAGAPQ8N103 731 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 CELF2-AS1Q8N7Q2 184 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 C7orf34Q96L11 122 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 CORO1BQ9BR76 489 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 STATHP02808 62 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 XPAP23025 273 aaPredicted RBP13.52□□□□□ -0.24
COL6A1-207ENST00000612273 ALDH9A1P49189 494 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 SPINT3P49223 89 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 PPP5CP53041 499 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 ZC3H12BQ5HYM0 836 aaKnown RBP13.52□□□□□ -0.24
COL6A1-207ENST00000612273 TNFAIP8L2Q6P589 184 aaPredicted RBP13.52□□□□□ -0.24
COL6A1-207ENST00000612273 NPAS3Q8IXF0 933 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 C11orf65Q8NCR3 313 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 OR7G3Q8NG95 312 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 NEIL2Q969S2 332 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 VMP1Q96GC9 406 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 SLC35A5Q9BS91 424 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 FAM83DQ9H4H8 585 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 ZDHHC4Q9NPG8 344 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 MRPL17Q9NRX2 175 aaKnown RBP13.52□□□□□ -0.24
COL6A1-207ENST00000612273 PCDHGB3Q9Y5G1 929 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 LYVE1Q9Y5Y7 322 aa13.52□□□□□ -0.24
COL6A1-207ENST00000612273 A0A0G2JN53 185 aa13.52□□□□□ -0.25
COL6A1-207ENST00000612273 WWP2O00308 870 aa13.52□□□□□ -0.25
COL6A1-207ENST00000612273 JUNDP17535 347 aa13.52□□□□□ -0.25
COL6A1-207ENST00000612273 TAB1Q15750 504 aa13.52□□□□□ -0.25
COL6A1-207ENST00000612273 TSTQ16762 297 aaKnown RBP13.52□□□□□ -0.25
COL6A1-207ENST00000612273 RPS26P11Q5JNZ5 115 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-207ENST00000612273 C22orf39Q6P5X5 142 aa13.52□□□□□ -0.25
COL6A1-207ENST00000612273 LYSMD2Q8IV50 215 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms