RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 ATXN3P54252 364 aaPredicted RBP11.05□□□□□ -0.64
CTCFL-221ENST00000608903 CSTF3Q12996 717 aaKnown RBP11.05□□□□□ -0.64
CTCFL-221ENST00000608903 OGFOD2Q6N063 350 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 ARMC6Q6NXE6 501 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 UBE3DQ7Z6J8 389 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 ZFAND4Q86XD8 727 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 WDR48Q8TAF3 677 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 CHTF18Q8WVB6 975 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 WDR60Q8WVS4 1066 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 CLPTM1LQ96KA5 538 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 F2RL3Q96RI0 385 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 CCT7Q99832 543 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 MS4A8Q9BY19 250 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 LRTM1Q9HBL6 345 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 KLHL3Q9UH77 587 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 DLGAP4Q9Y2H0 992 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 LRRC42Q9Y546 428 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 PCDHGB2Q9Y5G2 931 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 GPR45Q9Y5Y3 372 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 WDR87Q6ZQQ6 2873 aa11.05□□□□□ -0.64
CTCFL-221ENST00000608903 UBDO15205 165 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 P2RX6O15547 441 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 ZW10O43264 779 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 RGS14O43566 566 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 GDF9O60383 454 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 RSL1D1O76021 490 aaKnown RBP11.04□□□□□ -0.64
CTCFL-221ENST00000608903 C9P02748 559 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 PNLIPP16233 465 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 HRH2P25021 359 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 CXCR2P25025 360 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 GABRA4P48169 554 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 EMX2Q04743 252 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 TAF11Q15544 211 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 ATP6AP1LQ52LC2 224 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 WASHC2DQ5SRD0 308 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 METTL21CQ5VZV1 264 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 CPSF7Q8N684 471 aaKnown RBP11.04□□□□□ -0.64
CTCFL-221ENST00000608903 AMER3Q8N944 861 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 ZUFSPQ96AP4 578 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 CMTM7Q96FZ5 175 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 NAF1Q96HR8 494 aaKnown RBP11.04□□□□□ -0.64
CTCFL-221ENST00000608903 TEX37Q96LM6 180 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 PRRX2Q99811 253 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 CCDC3Q9BQI4 270 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 ZNF717Q9BY31 904 aaPredicted RBP11.04□□□□□ -0.64
CTCFL-221ENST00000608903 PITHD1Q9GZP4 211 aaPredicted RBP11.04□□□□□ -0.64
CTCFL-221ENST00000608903 ACTL8Q9H568 366 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 BRF2Q9HAW0 419 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 LHX9Q9NQ69 397 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 RIC8BQ9NVN3 520 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.04□□□□□ -0.64
CTCFL-221ENST00000608903 C1orf109Q9NX04 203 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 VPS29Q9UBQ0 182 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 HCN4Q9Y3Q4 1203 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 AP1M2Q9Y6Q5 423 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 SPTBP11277 2137 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 SPEGQ15772 3267 aa11.04□□□□□ -0.64
CTCFL-221ENST00000608903 A6NHS1 94 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 RTCAO00442 366 aaKnown RBP11.03□□□□□ -0.64
CTCFL-221ENST00000608903 VPS4BO75351 444 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 SEC22BO75396 215 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 B3GALT4O96024 378 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 CDH3P22223 829 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 GPX3P22352 226 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 TACR1P25103 407 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 PGM1P36871 562 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 ZFP36L2P47974 494 aaKnown RBP11.03□□□□□ -0.64
CTCFL-221ENST00000608903 NME5P56597 212 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 ERVK-8P63133 956 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 RPL38P63173 70 aaKnown RBP11.03□□□□□ -0.64
CTCFL-221ENST00000608903 SLC25A3Q00325 362 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 ZNF33BQ06732 778 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 CSRP2Q16527 193 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 IMPG1Q17R60 797 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 IL23RQ5VWK5 629 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 KLHL35Q6PF15 583 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 RNF44Q7L0R7 432 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 DNAJC22Q8N4W6 341 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 FNDC5Q8NAU1 212 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 OR9I1Q8NGQ6 314 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 IFI44Q8TCB0 444 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 UBE2E3Q969T4 207 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 REPS1Q96D71 796 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 TM4SF19Q96DZ7 209 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 FCRL1Q96LA6 429 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 PPP3R2Q96LZ3 170 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 EDEM2Q9BV94 578 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 C1GALT1Q9NS00 363 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 AIG1Q9NVV5 245 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 POLR3HQ9Y535 204 aaPredicted RBP11.03□□□□□ -0.64
CTCFL-221ENST00000608903 LOC100653049A0A140TA62 436 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 LRIT2A6NDA9 550 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 ANKDD1BA6NHY2 528 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 C9JVG2 144 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 ANKRD28O15084 1053 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 KRT34O76011 436 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 FKBP9O95302 570 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 SLC34A2O95436 690 aa11.03□□□□□ -0.64
CTCFL-221ENST00000608903 LMNAP02545 664 aaKnown RBP11.03□□□□□ -0.64
CTCFL-221ENST00000608903 G6PDP11413 515 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms