RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 PPP3R2Q96LZ3 170 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 MS4A8Q9BY19 250 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 OR51B5Q9H339 312 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 ZNF768Q9H5H4 540 aaKnown RBP10.64□□□□□ -0.71
CTCFL-214ENST00000608108 LRTM1Q9HBL6 345 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 PDE7BQ9NP56 450 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 NMRK1Q9NWW6 199 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 SEMA5BQ9P283 1151 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 HEY2Q9UBP5 337 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 PPT2Q9UMR5 302 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 SCN3AQ9NY46 2000 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 WDFY3Q8IZQ1 3526 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 COL27A1Q8IZC6 1860 aaPredicted RBP10.63□□□□□ -0.71
CTCFL-214ENST00000608108 LOC105369274A0A096LPK9 316 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 LOC102723532A0A0G2JNH3 316 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 IGHV5-10-1A0A0J9YXX1 117 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 H0YGG7 62 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 NTN3O00634 580 aaPredicted RBP10.63□□□□□ -0.71
CTCFL-214ENST00000608108 HCRTR1O43613 425 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 TBX6O95947 436 aaPredicted RBP10.63□□□□□ -0.71
CTCFL-214ENST00000608108 ANKRD34CP0C6C1 535 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 SLC35G6P0C7Q6 338 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 PRR35P0CG20 571 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 PRPH2P23942 346 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 PTX3P26022 381 aaPredicted RBP10.63□□□□□ -0.71
CTCFL-214ENST00000608108 ARF3P61204 181 aaPredicted RBP10.63□□□□□ -0.71
CTCFL-214ENST00000608108 KCNAB1Q14722 419 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 CCDC157Q569K6 752 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 C6orf136Q5SQH8 315 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 KHDRBS2Q5VWX1 349 aaKnown RBP10.63□□□□□ -0.71
CTCFL-214ENST00000608108 PIP4P1Q86T03 277 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 KMT5CQ86Y97 462 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 OR4N4Q8N0Y3 316 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 SLC41A2Q96JW4 573 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 SERPINI1Q99574 410 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 MACROD1Q9BQ69 325 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 CENPKQ9BS16 269 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 C1orf50Q9BV19 199 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 MRPL1Q9BYD6 325 aaKnown RBP10.63□□□□□ -0.71
CTCFL-214ENST00000608108 KRTAP3-3Q9BYR6 98 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 KRTAP3-2Q9BYR7 98 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 CHRNA10Q9GZZ6 450 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 C1orf109Q9NX04 203 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.63□□□□□ -0.71
CTCFL-214ENST00000608108 TRIM33Q9UPN9 1127 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 KIF26BQ2KJY2 2108 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 KNTC1P50748 2209 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 CFAP54Q96N23 3096 aa10.63□□□□□ -0.71
CTCFL-214ENST00000608108 SEC16AO15027 2179 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 NPIPB8E9PQR5 432 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 SAP18O00422 153 aaKnown RBP10.62□□□□□ -0.71
CTCFL-214ENST00000608108 UBDO15205 165 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 P2RX6O15547 441 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 SEC22BO75396 215 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 RFPL3O75679 317 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 EIF2S1P05198 315 aaKnown RBP10.62□□□□□ -0.71
CTCFL-214ENST00000608108 SERPINA6P08185 405 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 NELFEP18615 380 aaKnown RBP10.62□□□□□ -0.71
CTCFL-214ENST00000608108 NCF2P19878 526 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-214ENST00000608108 HNRNPH1P31943 449 aaKnown RBP10.62□□□□□ -0.71
CTCFL-214ENST00000608108 VSX2P58304 361 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-214ENST00000608108 ERVK-8P63133 956 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 RGS1Q08116 209 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 ACSM2AQ08AH3 577 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 HYAL2Q12891 473 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 ILKQ13418 452 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 PWP1Q13610 501 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 CUL3Q13618 768 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 RFTN2Q52LD8 501 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-214ENST00000608108 SPIN4Q56A73 249 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 ACSM2BQ68CK6 577 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 OGFOD2Q6N063 350 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 CHSY3Q70JA7 882 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 ZFAND4Q86XD8 727 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 SLITRK4Q8IW52 837 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 DNAJC22Q8N4W6 341 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 ZNF655Q8N720 491 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-214ENST00000608108 CSNK1A1LQ8N752 337 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 CAMKVQ8NCB2 501 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 RCBTB1Q8NDN9 531 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 WDR48Q8TAF3 677 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 NT5CQ8TCD5 201 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 KLHL6Q8WZ60 621 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 APIPQ96GX9 242 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 MARK4Q96L34 752 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 CCDC74BQ96LY2 380 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 F2RL3Q96RI0 385 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 REXO4Q9GZR2 422 aaKnown RBP10.62□□□□□ -0.71
CTCFL-214ENST00000608108 PDP2Q9P2J9 529 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 G3BP2Q9UN86 482 aaKnown RBP10.62□□□□□ -0.71
CTCFL-214ENST00000608108 POLR3HQ9Y535 204 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-214ENST00000608108 LRIT2A6NDA9 550 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 DCTN3O75935 186 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 SEMA3DO95025 777 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 ALDOCP09972 364 aaKnown RBP10.62□□□□□ -0.71
CTCFL-214ENST00000608108 GABRA4P48169 554 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 RAP1GDS1P52306 607 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 LIMK1P53667 647 aa10.62□□□□□ -0.71
CTCFL-214ENST00000608108 STXBP1P61764 594 aaKnown RBP10.62□□□□□ -0.71
CTCFL-214ENST00000608108 EMX2Q04743 252 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms