RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ZNF490Q9ULM2 529 aaPredicted RBP13.57□□□□□ -0.24
CTSA-219ENST00000607841 FARSAQ9Y285 508 aaKnown RBP13.57□□□□□ -0.24
CTSA-219ENST00000607841 STK38LQ9Y2H1 464 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 PCDHGA6Q9Y5G7 932 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 PCDHGA11Q9Y5H2 935 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 SLC22A7Q9Y694 548 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 H0YIG0 161 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 H0YIV9 168 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 OR7A17O14581 309 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 STATHP02808 62 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 CD22P20273 847 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 PTPN4P29074 926 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 OR1D4P47884 311 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 DNAJB13P59910 316 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 PHEXP78562 749 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 CLCQ05315 142 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 NCF4Q15080 339 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 RBBP7Q16576 425 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 TNFAIP8L3Q5GJ75 292 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 CFAP157Q5JU67 520 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 C10orf62Q5T681 223 aaPredicted RBP13.56□□□□□ -0.24
CTSA-219ENST00000607841 ARHGAP40Q5TG30 622 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 OVCH1Q7RTY7 1134 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 MILR1Q7Z6M3 343 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 EXOC3L1Q86VI1 746 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 LAS2Q8IYD9 372 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 ARHGEF39Q8N4T4 335 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 KCT2Q8NC54 265 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 ARMC2Q8NEN0 867 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 CREB3L4Q8TEY5 395 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 SREK1Q8WXA9 508 aaKnown RBP13.56□□□□□ -0.24
CTSA-219ENST00000607841 CCT6BQ92526 530 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 FKBP10Q96AY3 582 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 MMABQ96EY8 250 aaPredicted RBP13.56□□□□□ -0.24
CTSA-219ENST00000607841 FAM111AQ96PZ2 611 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 TMEM237Q96Q45 408 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 MACROD1Q9BQ69 325 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 OXSMQ9NWU1 459 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 CACNA1GO43497 2377 aa13.56□□□□□ -0.24
CTSA-219ENST00000607841 A0A0A6YYC8 382 aaPredicted RBP13.55□□□□□ -0.24
CTSA-219ENST00000607841 ZNF891A8MT65 544 aaPredicted RBP13.55□□□□□ -0.24
CTSA-219ENST00000607841 H3BQF6 201 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 I3L1I5 382 aaPredicted RBP13.55□□□□□ -0.24
CTSA-219ENST00000607841 TERTO14746 1132 aaKnown RBP13.55□□□□□ -0.24
CTSA-219ENST00000607841 EFSO43281 561 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 TYROBPO43914 113 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 MED26O95402 600 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 NSA2O95478 260 aaKnown RBP13.55□□□□□ -0.24
CTSA-219ENST00000607841 RECKO95980 971 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 PCNAP12004 261 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 ALOX12P18054 663 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 FBLP22087 321 aaKnown RBP13.55□□□□□ -0.24
CTSA-219ENST00000607841 CDH13P55290 713 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 TGM3Q08188 693 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 VAC14Q08AM6 782 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 DSG2Q14126 1118 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 CPSF6Q16630 551 aaKnown RBP eCLIP13.55□□□□□ -0.24
CTSA-219ENST00000607841 UNC50Q53HI1 259 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 LIPMQ5VYY2 423 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 LCN10Q6JVE6 187 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 FAM198BQ6UWH4 519 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 SYVN1Q86TM6 617 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 METTL27Q8N6F8 245 aaPredicted RBP13.55□□□□□ -0.24
CTSA-219ENST00000607841 CCNYL1Q8N7R7 359 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 ENDOVQ8N8Q3 282 aaKnown RBP13.55□□□□□ -0.24
CTSA-219ENST00000607841 OR7G3Q8NG95 312 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 OR52B6Q8NGF0 335 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 ZCCHC10Q8TBK6 192 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 TRPC4APQ8TEL6 797 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 STARD8Q92502 1023 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 MOCOSQ96EN8 888 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 NSUN5Q96P11 429 aaKnown RBP13.55□□□□□ -0.24
CTSA-219ENST00000607841 SLC6A16Q9GZN6 736 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 C12orf65Q9H3J6 166 aaKnown RBP13.55□□□□□ -0.24
CTSA-219ENST00000607841 ZBTB26Q9HCK0 441 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 NXT1Q9UKK6 140 aaKnown RBP13.55□□□□□ -0.24
CTSA-219ENST00000607841 TSC22D4Q9Y3Q8 395 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 MAU2Q9Y6X3 613 aa13.55□□□□□ -0.24
CTSA-219ENST00000607841 PCM1Q15154 2024 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 A0A088AWK7 358 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 LRIT2A6NDA9 550 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 K7ENP7 123 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 TM9SF1O15321 606 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 FOXS1O43638 330 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 TRIM13O60858 407 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 CREG1O75629 220 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 CAPN1P07384 714 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 ATXN8OSP0DMR3 200 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 CREB1P16220 341 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 ZNF10P21506 573 aaPredicted RBP13.54□□□□□ -0.24
CTSA-219ENST00000607841 F8A1P23610 371 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 PIK3CBP42338 1070 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 NAGLUP54802 743 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 OCA2Q04671 838 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 LCP2Q13094 533 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 SRSF6Q13247 344 aaKnown RBP13.54□□□□□ -0.24
CTSA-219ENST00000607841 SLC9A5Q14940 896 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 GGTA1PQ4G0N0 100 aa13.54□□□□□ -0.24
CTSA-219ENST00000607841 CRTC2Q53ET0 693 aaPredicted RBP13.54□□□□□ -0.24
CTSA-219ENST00000607841 TOR1AIP1Q5JTV8 583 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms