RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 CLN3Q13286 438 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 DSG2Q14126 1118 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CFAP157Q5JU67 520 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 C16orf46Q6P387 395 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 RNF165Q6ZSG1 346 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 TTLL10Q6ZVT0 673 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 OR4N4Q8N0Y3 316 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 AFAP1L2Q8N4X5 818 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 IL22RA1Q8N6P7 574 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ANKRD53Q8N9V6 530 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ARMC2Q8NEN0 867 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 OR7G3Q8NG95 312 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 RAB3IL1Q8TBN0 382 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ADAMTS18Q8TE60 1221 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 NKD1Q969G9 470 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ATP6V1E2Q96A05 226 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ESAMQ96AP7 390 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CNDP1Q96KN2 507 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ATP6V1G3Q96LB4 118 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 C10orf90Q96M02 699 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 GSTO2Q9H4Y5 243 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 NOL11Q9H8H0 719 aaKnown RBP9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ZBTB26Q9HCK0 441 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 C14orf105Q9NVL8 296 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 SNX6Q9UNH7 406 aa9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 RUVBL1Q9Y265 456 aaKnown RBP9.03□□□□□ -0.96
SQSTM1P1-201ENST00000603451 SPTBP11277 2137 aa9.02□□□□□ -0.96
SQSTM1P1-201ENST00000603451 IGLV3-12A0A075B6K2 115 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 FEZF1A0PJY2 475 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SERTM1A2A2V5 107 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 FOXO6A8MYZ6 492 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 AGPSO00116 658 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 TERTO14746 1132 aaKnown RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 LCMT2O60294 686 aaKnown RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 PRAMEF4O60810 478 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SPAG7O75391 227 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SEMA3DO95025 777 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ESRRBO95718 433 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 KRT6AP02538 564 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 KRT6BP04259 564 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 EIF2S1P05198 315 aaKnown RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 BPGMP07738 259 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ZNF28P17035 718 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ALOX12P18054 663 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ITGAXP20702 1163 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 GRK2P25098 689 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 VARSP26640 1264 aaKnown RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 KRT6CP48668 564 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 NAGLUP54802 743 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 RPS15P62841 145 aaKnown RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 MEF2AQ02078 507 aaPredicted RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CSTF3Q12996 717 aaKnown RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CUL3Q13618 768 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 RBBP5Q15291 538 aaKnown RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 RBBP7Q16576 425 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 HKDC1Q2TB90 917 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 NKAIN1Q4KMZ8 207 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 UNC50Q53HI1 259 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 FBXO48Q5FWF7 155 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 PRAMEF9Q5VWM5 478 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 FRG2Q64ET8 278 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 TRIM40Q6P9F5 258 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 GPRIN3Q6ZVF9 776 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CHSY3Q70JA7 882 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 MED25Q71SY5 747 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 TIPARPQ7Z3E1 657 aaKnown RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 MILR1Q7Z6M3 343 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ZFAND4Q86XD8 727 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 PLD3Q8IV08 490 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 GBP7Q8N8V2 638 aaPredicted RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SLC38A9Q8NBW4 561 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 GALNT6Q8NCL4 622 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ZNF740Q8NDX6 193 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 C7orf57Q8NEG2 295 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 OR2L5Q8NG80 312 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 OR52B6Q8NGF0 335 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CREB3L4Q8TEY5 395 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ZNF473Q8WTR7 871 aaKnown RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SNRNP27Q8WVK2 155 aaKnown RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CMTM7Q96FZ5 175 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SLC45A3Q96JT2 553 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 FRG2BQ96QU4 278 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 CCNL2Q96S94 520 aaPredicted RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 TGIF2Q9GZN2 237 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SPRTNQ9H040 489 aaPredicted RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SPNS1Q9H2V7 528 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 BRF2Q9HAW0 419 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 EML4Q9HC35 981 aaKnown RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ANKHQ9HCJ1 492 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ZNF304Q9HCX3 659 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SEMA4BQ9NPR2 832 aaPredicted RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 NMRK1Q9NWW6 199 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 NKIRAS1Q9NYS0 192 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SLC17A7Q9P2U7 560 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 MAP4K5Q9Y4K4 846 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 TPRP12270 2363 aaKnown RBP9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 SEC16AO15027 2179 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 FREM2Q5SZK8 3169 aa9.02□□□□□ -0.97
SQSTM1P1-201ENST00000603451 ASPMQ8IZT6 3477 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms