RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 DLSTP36957 453 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 RPS15P62841 145 aaKnown RBP13.2□□□□□ -0.3
RNF40-212ENST00000602784 DNASE1L3Q13609 305 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 HERC3Q15034 1050 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 ST3GAL2Q16842 350 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 GGTA1PQ4G0N0 100 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 CRTC2Q53ET0 693 aaPredicted RBP13.2□□□□□ -0.3
RNF40-212ENST00000602784 UNC50Q53HI1 259 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 C1orf189Q5VU69 101 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 LCN10Q6JVE6 187 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 FAM199XQ6PEV8 388 aaPredicted RBP13.2□□□□□ -0.3
RNF40-212ENST00000602784 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.2□□□□□ -0.3
RNF40-212ENST00000602784 AFAP1L2Q8N4X5 818 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 CCDC63Q8NA47 563 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 KCT2Q8NC54 265 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 OR7G3Q8NG95 312 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 TCP10LQ8TDR4 215 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 PPP4R1Q8TF05 950 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 SNRNP27Q8WVK2 155 aaKnown RBP13.2□□□□□ -0.3
RNF40-212ENST00000602784 ATP6V1E2Q96A05 226 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 FKBP10Q96AY3 582 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 REPS1Q96D71 796 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 MOCOSQ96EN8 888 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 RNF31Q96EP0 1072 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 SLC45A3Q96JT2 553 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 NSUN5Q96P11 429 aaKnown RBP13.2□□□□□ -0.3
RNF40-212ENST00000602784 TMEM237Q96Q45 408 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 C12orf65Q9H3J6 166 aaKnown RBP13.2□□□□□ -0.3
RNF40-212ENST00000602784 TMBIM4Q9HC24 238 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 ZNF304Q9HCX3 659 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 NDOR1Q9UHB4 597 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 STK38LQ9Y2H1 464 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 DSPP15924 2871 aaKnown RBP13.19□□□□□ -0.3
RNF40-212ENST00000602784 H0YIG0 161 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 EFSO43281 561 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 FOXS1O43638 330 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 SUPT7LO94864 414 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 NSA2O95478 260 aaKnown RBP13.19□□□□□ -0.3
RNF40-212ENST00000602784 MLYCDO95822 493 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 F8A1P23610 371 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 ITPKBP27987 946 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 PTPN4P29074 926 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 PIK3CBP42338 1070 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 NAGLUP54802 743 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 TMPRSS3P57727 454 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 STXBP1P61764 594 aaKnown RBP13.19□□□□□ -0.3
RNF40-212ENST00000602784 SKP1P63208 163 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 CLCQ05315 142 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 ASPHQ12797 758 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 HYAL2Q12891 473 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 TRAF3Q13114 568 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 DSG2Q14126 1118 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 NCF4Q15080 339 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 ADPRMQ3LIE5 342 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 FAM198BQ6UWH4 519 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 ABHD13Q7L211 337 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 OVCH1Q7RTY7 1134 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 VN1R5Q7Z5H4 357 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 MILR1Q7Z6M3 343 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 VASH2Q86V25 355 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 ARMC2Q8NEN0 867 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 OR52B6Q8NGF0 335 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 FAM111AQ96PZ2 611 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 ZNF382Q96SR6 550 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 MACROD1Q9BQ69 325 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 SLC26A1Q9H2B4 701 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 WDR54Q9H977 334 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 CLK4Q9HAZ1 481 aaKnown RBP13.19□□□□□ -0.3
RNF40-212ENST00000602784 SEMA4BQ9NPR2 832 aaPredicted RBP13.19□□□□□ -0.3
RNF40-212ENST00000602784 SLC22A11Q9NSA0 550 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 PSD3Q9NYI0 1048 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 IFT80Q9P2H3 777 aaPredicted RBP13.19□□□□□ -0.3
RNF40-212ENST00000602784 FARSAQ9Y285 508 aaKnown RBP13.19□□□□□ -0.3
RNF40-212ENST00000602784 RNF11Q9Y3C5 154 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 FER1L5A0AVI2 2057 aa13.19□□□□□ -0.3
RNF40-212ENST00000602784 CELSR3Q9NYQ7 3312 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 PTPRQQ9UMZ3 2332 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 LRIT2A6NDA9 550 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 H3BQF6 201 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 AGPSO00116 658 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 TM9SF1O15321 606 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 TRIM13O60858 407 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 STATHP02808 62 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 SERPIND1P05546 499 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 SMIM10L1P0DMW3 83 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 ALOX12P18054 663 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 ETV4P43268 484 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 AVPR1BP47901 424 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 SLC18A1P54219 525 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 CDH13P55290 713 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 PKNOX1P55347 436 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 CYP4F2P78329 520 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 MC1RQ01726 317 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 LCP2Q13094 533 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 PCLAFQ15004 111 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 LIPMQ5VYY2 423 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 MRPL14Q6P1L8 145 aaKnown RBP13.18□□□□□ -0.3
RNF40-212ENST00000602784 CCDC81Q6ZN84 652 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 MYLK4Q86YV6 388 aaPredicted RBP13.18□□□□□ -0.3
RNF40-212ENST00000602784 ZSCAN1Q8NBB4 408 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms