RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 CHRNA1P02708 482 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 ZNF19P17023 458 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 GSK3BP49841 420 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 RPL19P84098 196 aaKnown RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 ABHD15Q6UXT9 468 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 TMEM192Q8IY95 271 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 COX18Q8N8Q8 333 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 RIPOR3Q96MK2 946 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 FCF1Q9Y324 198 aaKnown RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 UGT2A1Q9Y4X1 527 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 CHD5Q8TDI0 1954 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 PCDHGA12O60330 932 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 POU4F2Q12837 409 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 ODF4Q2M2E3 257 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 AKR1C8PQ5T2L2 129 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 SERPINA9Q86WD7 417 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 UBQLNLQ8IYU4 475 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 LHPPQ9H008 270 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 DPEP3Q9H4B8 488 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 PCDHGB6Q9Y5F9 930 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 PCYT1BQ9Y5K3 369 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 SPTA1P02549 2419 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 RIMBP3CA6NJZ7 1639 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 RIMBP3BA6NNM3 1639 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 RIMBP3Q9UFD9 1639 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 H3BMQ9 156 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 OR4F21O95013 312 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 H2AFB2P0C5Z0 115 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 RHOQP17081 205 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 RORAP35398 523 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 NCBP2P52298 156 aaKnown RBP eCLIP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 GDF10P55107 478 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 SSTP61278 116 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 ADGRG6Q86SQ4 1221 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 MMAAQ8IVH4 418 aaKnown RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 DCUN1D3Q8IWE4 304 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 FAM110BQ8TC76 370 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 COG8Q96MW5 612 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 CDH7Q9ULB5 785 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 POLHQ9Y253 713 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 OTOFQ9HC10 1997 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 AQP12BA6NM10 295 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 PPP1R11O60927 126 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 GJA1P17302 382 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 AOC1P19801 751 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 HOXC12P31275 282 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 FXYD6P3P58550 94 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 MVKQ03426 396 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 CERS6Q6ZMG9 384 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 CPA6Q8N4T0 437 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 RBM18Q96H35 190 aaKnown RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 FKBPLQ9UIM3 349 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 SMLR1H3BR10 107 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 SLC33A1O00400 549 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 APODP05090 189 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 MAT2AP31153 395 aaKnown RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 GJA5P36382 358 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 NRLP54845 237 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 GXYLT1Q4G148 440 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 CNTNAP3BQ96NU0 1288 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 ZBTB20Q9HC78 741 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 ANKRD34BA5PLL1 514 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 AGPAT2O15120 278 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 GADD45GO95257 159 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 SOX14O95416 240 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 EPCAMP16422 314 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 PTNP21246 168 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 PLA2G16P53816 162 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 IFI44LQ53G44 452 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 DCAF12L1Q5VU92 463 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 SLC38A4Q969I6 547 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 ZDHHC18Q9NUE0 388 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 COPS7AQ9UBW8 275 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 PCDHGC4Q9Y5F7 938 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 ZFP37Q9Y6Q3 630 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 SCN2AQ99250 2005 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 TRIOBPQ9H2D6 2365 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 LRRC72A6NJI9 287 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 INSIG1O15503 277 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 HSD3B2P26439 372 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 ZNF572Q7Z3I7 529 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 UPF1Q92900 1129 aaKnown RBP eCLIP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 COL21A1Q96P44 957 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 TUBA1CQ9BQE3 449 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 PSD2Q9BQI7 771 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 SMIM35A0A1B0GVV1 85 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 GPR89AB7ZAQ6 455 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 E7EQ34 232 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 GOSR2O14653 212 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 PCDH17O14917 1159 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 VIPP01282 170 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 GPR89BP0CG08 455 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 CD6P30203 668 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 SLC6A9P48067 706 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 COL28A1Q2UY09 1125 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 AQP12AQ8IXF9 295 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 C9orf43Q8TAL5 461 aaPredicted RBP8.44□□□□□ -1.06
CSMD1-216ENST00000602557 TFAP2BQ92481 460 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 RHBDF1Q96CC6 855 aa8.44□□□□□ -1.06
CSMD1-216ENST00000602557 AURKBQ96GD4 344 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms