RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 HAUS8Q9BT25 410 aa12.39□□□□□ -0.43
RPS28-204ENST00000602140 H2AFJQ9BTM1 129 aa12.39□□□□□ -0.43
RPS28-204ENST00000602140 HES7Q9BYE0 225 aa12.39□□□□□ -0.43
RPS28-204ENST00000602140 RUBCNLQ9H714 662 aa12.39□□□□□ -0.43
RPS28-204ENST00000602140 MMP25Q9NPA2 562 aa12.39□□□□□ -0.43
RPS28-204ENST00000602140 LANCL2Q9NS86 450 aa12.39□□□□□ -0.43
RPS28-204ENST00000602140 ANKRD10Q9NXR5 420 aa12.39□□□□□ -0.43
RPS28-204ENST00000602140 PCDHGB6Q9Y5F9 930 aa12.39□□□□□ -0.43
RPS28-204ENST00000602140 KLF2Q9Y5W3 355 aaPredicted RBP12.39□□□□□ -0.43
RPS28-204ENST00000602140 SCN3AQ9NY46 2000 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 APCP25054 2843 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 MAGEB17A8MXT2 336 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 FAM227AF5H4B4 570 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 NDUFS4O43181 175 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 OR1F1O43749 312 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 MAN1A2O60476 641 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 SLC19A2O60779 497 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 TTC4O95801 387 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 AHSGP02765 367 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 SERPIND1P05546 499 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 IL10P22301 178 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 FNTAP49354 379 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 CCR8P51685 355 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 PGGT1BP53609 377 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 CASP6P55212 293 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 USP10Q14694 798 aaKnown RBP12.38□□□□□ -0.43
RPS28-204ENST00000602140 HERC3Q15034 1050 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 PPP1R7Q15435 360 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 OR1C1Q15619 314 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 DUPD1Q68J44 220 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 SPINK14Q6IE38 97 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 MTFR2Q6P444 385 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 ZNF808Q8N4W9 903 aaPredicted RBP12.38□□□□□ -0.43
RPS28-204ENST00000602140 SLC5A8Q8N695 610 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 ZNF740Q8NDX6 193 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 MDS2Q8NDY4 140 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 ABHD11Q8NFV4 315 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 OR4K1Q8NGD4 311 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 SNF8Q96H20 258 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 OR1F2PQ96R84 312 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 ARL15Q9NXU5 204 aa12.38□□□□□ -0.43
RPS28-204ENST00000602140 SCN2AQ99250 2005 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 MYO7BQ6PIF6 2116 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 TRBC2A0A5B9 178 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 PABPN1LA6NDY0 278 aaKnown RBP12.37□□□□□ -0.43
RPS28-204ENST00000602140 GABRR3A8MPY1 467 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 NRDCO43847 1150 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 GALR3O60755 368 aaPredicted RBP12.37□□□□□ -0.43
RPS28-204ENST00000602140 DNAJB6O75190 326 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 TSPAN12O95859 305 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 B3GALT4O96024 378 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 FHP07954 510 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 CD46P15529 392 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 HTR1EP28566 365 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 EEF1DP29692 281 aaKnown RBP12.37□□□□□ -0.43
RPS28-204ENST00000602140 OR4D2P58180 307 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 SLC26A5P58743 744 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 TAS2R50P59544 299 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 IL2P60568 153 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 OLR1P78380 273 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 ALDH6A1Q02252 535 aaKnown RBP12.37□□□□□ -0.43
RPS28-204ENST00000602140 OC90Q02509 493 aaPredicted RBP12.37□□□□□ -0.43
RPS28-204ENST00000602140 PDAP1Q13442 181 aaKnown RBP12.37□□□□□ -0.43
RPS28-204ENST00000602140 PWP1Q13610 501 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 C3AR1Q16581 482 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 DEFB134Q4QY38 66 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 MSS51Q4VC12 460 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 SPANXN3Q5MJ09 141 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 RPTNQ6XPR3 784 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 BNC2Q6ZN30 1099 aaPredicted RBP12.37□□□□□ -0.43
RPS28-204ENST00000602140 KIAA0408Q6ZU52 694 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 CNTN4Q8IWV2 1026 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 AFAP1L2Q8N4X5 818 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 OR56A3Q8NH54 315 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 TBC1D20Q96BZ9 403 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 SCMH1Q96GD3 660 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 GPR137Q96N19 417 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 OR4K3Q96R72 315 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 SARGQ9BW04 601 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 TRIM54Q9BYV2 358 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 TSPAN10Q9H1Z9 355 aaPredicted RBP12.37□□□□□ -0.43
RPS28-204ENST00000602140 CDCP1Q9H5V8 836 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 SLC17A6Q9P2U8 582 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 ASIC3Q9UHC3 531 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 TINAGQ9UJW2 476 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 FBN2P35556 2912 aa12.37□□□□□ -0.43
RPS28-204ENST00000602140 GOLGA6L10A0A0M3HER8 536 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 DNALI1O14645 258 aaPredicted RBP12.36□□□□□ -0.43
RPS28-204ENST00000602140 NDC80O14777 642 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 CHST10O43529 356 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 B4GALT2O60909 372 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 MLYCDO95822 493 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 GUCA1CO95843 209 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 ZNF888P0CJ79 500 aaPredicted RBP12.36□□□□□ -0.43
RPS28-204ENST00000602140 ESRRAP11474 423 aaPredicted RBP12.36□□□□□ -0.43
RPS28-204ENST00000602140 ALOX12P18054 663 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 AP1S2P56377 157 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 SKP1P63208 163 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 ADORA2A-AS1P86434 159 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 RGS1Q08116 209 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms