RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 NDUFS4O43181 175 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 EEDO75530 441 aaKnown RBP17.2■□□□□ 0.34
VRK3-225ENST00000601912 TBX6O95947 436 aaPredicted RBP17.2■□□□□ 0.34
VRK3-225ENST00000601912 GIMD1P0DJR0 217 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 CDH3P22223 829 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 CCT8P50990 548 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 ZNF763Q0D2J5 394 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 ZIC1Q15915 447 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 TIGD2Q4W5G0 525 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 FCRL6Q6DN72 434 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 IRGCQ6NXR0 463 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 FBXO42Q6P3S6 717 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 HACD2Q6Y1H2 254 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 ZNF438Q7Z4V0 828 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 SLC35F3Q8IY50 421 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 PGAM4Q8N0Y7 254 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 KRTCAP2Q8N6L1 136 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 SRFBP1Q8NEF9 429 aaKnown RBP17.2■□□□□ 0.34
VRK3-225ENST00000601912 SAP25Q8TEE9 199 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 SLC13A3Q8WWT9 602 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 VPS33AQ96AX1 596 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 AHCYL2Q96HN2 611 aaKnown RBP17.2■□□□□ 0.34
VRK3-225ENST00000601912 LOXL4Q96JB6 756 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 THTPAQ9BU02 230 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 EPB41L1Q9H4G0 881 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 WDR41Q9HAD4 459 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 SLC52A3Q9NQ40 469 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 FSCN3Q9NQT6 498 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 GID8Q9NWU2 228 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 GOLGA4Q13439 2230 aaKnown RBP17.19■□□□□ 0.34
VRK3-225ENST00000601912 A0A0C4DFX4 3053 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 PLPP1O14494 284 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 ARHGAP33O14559 1287 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 KLK1P06870 262 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 HOXB3P14651 431 aaPredicted RBP17.19■□□□□ 0.34
VRK3-225ENST00000601912 ALDH4A1P30038 563 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 GPR3P46089 330 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 LSSP48449 732 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 STXBP1P61764 594 aaKnown RBP17.19■□□□□ 0.34
VRK3-225ENST00000601912 RGS1Q08116 209 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 LPAL2Q16609 132 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 DPY19L1Q2PZI1 675 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 FAM174BQ3ZCQ3 159 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 KANSL1Q7Z3B3 1105 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 GATAD2AQ86YP4 633 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 CDC26Q8NHZ8 85 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 WDR48Q8TAF3 677 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 TESCQ96BS2 214 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 EGLN2Q96KS0 407 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 TMEM74Q96NL1 305 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 ZFYVE21Q9BQ24 234 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 KLHL25Q9H0H3 589 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 ABCG4Q9H172 646 aa17.19■□□□□ 0.34
VRK3-225ENST00000601912 A0A0J9YVX5 310 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 PATE3B3GLJ2 98 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 LRATO95237 230 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 PGRP06401 933 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 PVRP15151 417 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 S100A3P33764 101 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 ARFIP1P53367 373 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 NUBP1P53384 320 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 C21orf58P58505 322 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 PPP1CAP62136 330 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 TGM3Q08188 693 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 PWP1Q13610 501 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 CCNYL2Q5T2Q4 361 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 ASPGQ86U10 573 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 NUDT13Q86X67 352 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 RIMKLAQ8IXN7 391 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 OR6C4Q8NGE1 309 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 OR4C6Q8NH72 309 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 GFM2Q969S9 779 aaKnown RBP17.18■□□□□ 0.34
VRK3-225ENST00000601912 RERGQ96A58 199 aaPredicted RBP17.18■□□□□ 0.34
VRK3-225ENST00000601912 PPM1MQ96MI6 270 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 PRPF18Q99633 342 aaKnown RBP17.18■□□□□ 0.34
VRK3-225ENST00000601912 IL21RQ9HBE5 538 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 C1GALT1Q9NS00 363 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 EVA1BQ9NVM1 165 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 ADAM29Q9UKF5 820 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 CROTQ9UKG9 612 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 PILRAQ9UKJ1 303 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 RAB23Q9ULC3 237 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 PADI4Q9UM07 663 aa17.18■□□□□ 0.34
VRK3-225ENST00000601912 PRPF19Q9UMS4 504 aaKnown RBP17.18■□□□□ 0.34
VRK3-225ENST00000601912 FAM86C2PA6NEL3 165 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 CAPN5O15484 640 aaPredicted RBP17.17■□□□□ 0.34
VRK3-225ENST00000601912 AKAP10O43572 662 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 GALR2O43603 387 aaPredicted RBP17.17■□□□□ 0.34
VRK3-225ENST00000601912 CTSVO60911 334 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 SLC35G6P0C7Q6 338 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 HNRNPH1P31943 449 aaKnown RBP17.17■□□□□ 0.34
VRK3-225ENST00000601912 HPCAL1P37235 193 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 DGKQP52824 942 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 SRSF11Q05519 484 aaKnown RBP17.17■□□□□ 0.34
VRK3-225ENST00000601912 TLR1Q15399 786 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 HKDC1Q2TB90 917 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 ADPRMQ3LIE5 342 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 SPANXN4Q5MJ08 99 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 RETREG3Q86VR2 466 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 TMEM132CQ8N3T6 1108 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms