RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 MVB12AQ96EY5 273 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 ABHD17AQ96GS6 310 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 SMIM10Q96HG1 83 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 AIF1LQ9BQI0 150 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 ARHGAP9Q9BRR9 750 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 SLC6A16Q9GZN6 736 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 P4HTMQ9NXG6 502 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 GPRC5BQ9NZH0 403 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 HCN3Q9P1Z3 774 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 COPG2Q9UBF2 871 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 TRPC4Q9UBN4 977 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 CDC14AQ9UNH5 594 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 PADI2Q9Y2J8 665 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 HS3ST3B1Q9Y662 390 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 IKBKGQ9Y6K9 419 aa10.57□□□□□ -0.72
VRK3-210ENST00000596121 ZNF462Q96JM2 2506 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 ZNF860A6NHJ4 632 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 GOLGA8RI6L899 631 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 K7EPI3 171 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 GALR3O60755 368 aaPredicted RBP10.56□□□□□ -0.72
VRK3-210ENST00000596121 ALOX12BO75342 701 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 RDH16O75452 317 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 KLHL18O94889 574 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 NSA2O95478 260 aaKnown RBP10.56□□□□□ -0.72
VRK3-210ENST00000596121 S100BP04271 92 aaPredicted RBP10.56□□□□□ -0.72
VRK3-210ENST00000596121 ZNF888P0CJ79 500 aaPredicted RBP10.56□□□□□ -0.72
VRK3-210ENST00000596121 COL6A2P12110 1019 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 HNRNPH1P31943 449 aaKnown RBP10.56□□□□□ -0.72
VRK3-210ENST00000596121 HSD17B3P37058 310 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 HNF4AP41235 474 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 CASP2P42575 452 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 ALDH18A1P54886 795 aaKnown RBP10.56□□□□□ -0.72
VRK3-210ENST00000596121 OLR1P78380 273 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 PCDH1Q08174 1060 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 CHIT1Q13231 466 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 PCBP2Q15366 365 aaKnown RBP eCLIP10.56□□□□□ -0.72
VRK3-210ENST00000596121 XKR6Q5GH73 641 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 KIRREL2Q6UWL6 708 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 TMIGD1Q6UXZ0 262 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 LRRC70Q7Z2Q7 622 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 TEX9Q8N6V9 391 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 PTGR2Q8N8N7 351 aaPredicted RBP10.56□□□□□ -0.72
VRK3-210ENST00000596121 UTP15Q8TED0 518 aaKnown RBP10.56□□□□□ -0.72
VRK3-210ENST00000596121 UBLCP1Q8WVY7 318 aaPredicted RBP10.56□□□□□ -0.72
VRK3-210ENST00000596121 MIEF2Q96C03 454 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 YIPF2Q9BWQ6 316 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 TGIF2Q9GZN2 237 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 ING2Q9H160 280 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 EHD1Q9H4M9 534 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 NT5DC2Q9H857 520 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 CNOT10Q9H9A5 744 aaKnown RBP10.56□□□□□ -0.72
VRK3-210ENST00000596121 ZNF71Q9NQZ8 489 aaPredicted RBP10.56□□□□□ -0.72
VRK3-210ENST00000596121 TMEM216Q9P0N5 145 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 CPSF2Q9P2I0 782 aaKnown RBP10.56□□□□□ -0.72
VRK3-210ENST00000596121 XPR1Q9UBH6 696 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 ZNF282Q9UDV7 671 aaPredicted RBP10.56□□□□□ -0.72
VRK3-210ENST00000596121 FETUBQ9UGM5 382 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 TBK1Q9UHD2 729 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 NAALAD2Q9Y3Q0 740 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 MAP4K5Q9Y4K4 846 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 SLC22A7Q9Y694 548 aa10.56□□□□□ -0.72
VRK3-210ENST00000596121 CCDC189A1A4V9 331 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 SYCE1LA8MT33 242 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 H0YIG0 161 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 CLGNO14967 610 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 H2AFYO75367 372 aaKnown RBP10.55□□□□□ -0.72
VRK3-210ENST00000596121 CEACAM4O75871 244 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 BMP10O95393 424 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 SERPINA6P08185 405 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 CD63P08962 238 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 SLC35G6P0C7Q6 338 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 PYGBP11216 843 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 GFAPP14136 432 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 ALOX12P18054 663 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 MMP11P24347 488 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 SLCO1A2P46721 670 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 AVPR1BP47901 424 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 CCL11P51671 97 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 RAB8AP61006 207 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 Q0VFX4 171 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 TBCCQ15814 346 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 NDUFA9Q16795 377 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 DEFB134Q4QY38 66 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 TOR1AIP1Q5JTV8 583 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 COLEC12Q5KU26 742 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 WDR93Q6P2C0 686 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 RPS27LQ71UM5 84 aaKnown RBP10.55□□□□□ -0.72
VRK3-210ENST00000596121 TAOK1Q7L7X3 1001 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 GOLGA7Q7Z5G4 137 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 UBE3DQ7Z6J8 389 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 RAB43Q86YS6 212 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 RNF175Q8N4F7 328 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 OR51Q1Q8NH59 317 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 OR2W6PQ8NHA6 318 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 EPS8L3Q8TE67 593 aaKnown RBP10.55□□□□□ -0.72
VRK3-210ENST00000596121 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.55□□□□□ -0.72
VRK3-210ENST00000596121 C8orf44Q96CB5 159 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 PHF21BQ96EK2 531 aa10.55□□□□□ -0.72
VRK3-210ENST00000596121 PTCD3Q96EY7 689 aaKnown RBP10.55□□□□□ -0.72
VRK3-210ENST00000596121 SCYL1Q96KG9 808 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms