RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 HNF4AP41235 474 aa18.39■□□□□ 0.53
PNKP-207ENST00000596014 STAT5AP42229 794 aa18.39■□□□□ 0.53
PNKP-207ENST00000596014 CCNG1P51959 295 aa18.39■□□□□ 0.53
PNKP-207ENST00000596014 DNAJB13P59910 316 aa18.39■□□□□ 0.53
PNKP-207ENST00000596014 CYP4F2P78329 520 aa18.39■□□□□ 0.53
PNKP-207ENST00000596014 GARNL3Q5VVW2 1013 aa18.39■□□□□ 0.53
PNKP-207ENST00000596014 GRHL2Q6ISB3 625 aa18.39■□□□□ 0.53
PNKP-207ENST00000596014 FAM199XQ6PEV8 388 aaPredicted RBP18.39■□□□□ 0.53
PNKP-207ENST00000596014 MYLK4Q86YV6 388 aaPredicted RBP18.39■□□□□ 0.53
PNKP-207ENST00000596014 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.39■□□□□ 0.53
PNKP-207ENST00000596014 KCT2Q8NC54 265 aa18.39■□□□□ 0.53
PNKP-207ENST00000596014 TTLQ8NG68 377 aa18.39■□□□□ 0.53
PNKP-207ENST00000596014 CDK15Q96Q40 435 aa18.39■□□□□ 0.53
PNKP-207ENST00000596014 DPH2Q9BQC3 489 aaPredicted RBP18.39■□□□□ 0.53
PNKP-207ENST00000596014 RABEP2Q9H5N1 569 aa18.39■□□□□ 0.53
PNKP-207ENST00000596014 NDOR1Q9UHB4 597 aa18.39■□□□□ 0.53
PNKP-207ENST00000596014 RNF11Q9Y3C5 154 aa18.39■□□□□ 0.53
PNKP-207ENST00000596014 DSPP15924 2871 aaKnown RBP18.38■□□□□ 0.53
PNKP-207ENST00000596014 LOC101059948A0A1B0GTJ6 334 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 CLDN9O95484 217 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 TSPAN8P19075 237 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 PCLAFQ15004 111 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 ADNP2Q6IQ32 1131 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 LCN10Q6JVE6 187 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 TMEM214Q6NUQ4 689 aaKnown RBP18.38■□□□□ 0.53
PNKP-207ENST00000596014 C10orf107Q8IVU9 208 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 SPACA3Q8IXA5 215 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 LAS2Q8IYD9 372 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 DTWD1Q8N5C7 304 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 L3MBTL4Q8NA19 623 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 NT5CQ8TCD5 201 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 TRPC4APQ8TEL6 797 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 CREB3L4Q8TEY5 395 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 UBE2E3Q969T4 207 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 SEC16BQ96JE7 1060 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 CHST8Q9H2A9 424 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 RHBGQ9H310 441 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 ZMIZ1Q9ULJ6 1067 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 CCDC88CQ9P219 2028 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 A0A087WV48 116 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 ANKDD1BA6NHY2 528 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 AGXTP21549 392 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 GSTM2P28161 218 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 ARL1P40616 181 aaPredicted RBP18.38■□□□□ 0.53
PNKP-207ENST00000596014 ETV4P43268 484 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 NAGLUP54802 743 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 SNRPNP63162 240 aaKnown RBP18.38■□□□□ 0.53
PNKP-207ENST00000596014 DCDP81605 110 aaKnown RBP18.38■□□□□ 0.53
PNKP-207ENST00000596014 TRAF3Q13114 568 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 RBBP7Q16576 425 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 LIPMQ5VYY2 423 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 MED27Q6P2C8 311 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 LRRC69Q6ZNQ3 347 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 VN1R5Q7Z5H4 357 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 VASH2Q86V25 355 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 CCNYL1Q8N7R7 359 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 OR7G3Q8NG95 312 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 USP24Q9UPU5 2620 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 SSUH2Q9Y2M2 353 aa18.38■□□□□ 0.53
PNKP-207ENST00000596014 MRPS2Q9Y399 296 aaKnown RBP18.38■□□□□ 0.53
PNKP-207ENST00000596014 A0A1B0GTL3 188 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 NDUFAB1O14561 156 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 PRPF4O43172 522 aaKnown RBP eCLIP18.37■□□□□ 0.536e-7■■■■□ 23.2
PNKP-207ENST00000596014 OTCP00480 354 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 SERPINA6P08185 405 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 TCN2P20062 427 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 ITGAXP20702 1163 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 HNRNPH2P55795 449 aaKnown RBP18.37■□□□□ 0.53
PNKP-207ENST00000596014 RGS1Q08116 209 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 HYAL2Q12891 473 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 FAM53BQ14153 422 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 MPP2Q14168 576 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 CPSF6Q16630 551 aaKnown RBP eCLIP18.37■□□□□ 0.53
PNKP-207ENST00000596014 NDUFA9Q16795 377 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 NKAIN1Q4KMZ8 207 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 MILR1Q7Z6M3 343 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 METTL27Q8N6F8 245 aaPredicted RBP18.37■□□□□ 0.53
PNKP-207ENST00000596014 OR4F6Q8NGB9 312 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 CT55Q8WUE5 264 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 GSTO2Q9H4Y5 243 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 KCNK9Q9NPC2 374 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 CROTQ9UKG9 612 aa18.37■□□□□ 0.53
PNKP-207ENST00000596014 H0YIV9 168 aa18.36■□□□□ 0.53
PNKP-207ENST00000596014 TERTO14746 1132 aaKnown RBP18.36■□□□□ 0.53
PNKP-207ENST00000596014 TRIM13O60858 407 aa18.36■□□□□ 0.53
PNKP-207ENST00000596014 CLEC3AO75596 197 aa18.36■□□□□ 0.53
PNKP-207ENST00000596014 ALDH3A1P30838 453 aa18.36■□□□□ 0.53
PNKP-207ENST00000596014 DLSTP36957 453 aa18.36■□□□□ 0.53
PNKP-207ENST00000596014 SRSF6Q13247 344 aaKnown RBP18.36■□□□□ 0.53
PNKP-207ENST00000596014 PRMT9Q6P2P2 845 aa18.36■□□□□ 0.53
PNKP-207ENST00000596014 MVB12AQ96EY5 273 aa18.36■□□□□ 0.53
PNKP-207ENST00000596014 SLC6A16Q9GZN6 736 aa18.36■□□□□ 0.53
PNKP-207ENST00000596014 DRC3Q9H069 523 aa18.36■□□□□ 0.53
PNKP-207ENST00000596014 ZNF225Q9UK10 706 aa18.36■□□□□ 0.53
PNKP-207ENST00000596014 PCDHGA11Q9Y5H2 935 aa18.36■□□□□ 0.53
PNKP-207ENST00000596014 SLC22A7Q9Y694 548 aa18.36■□□□□ 0.53
PNKP-207ENST00000596014 EPG5Q9HCE0 2579 aa18.36■□□□□ 0.53
PNKP-207ENST00000596014 TM9SF1O15321 606 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 FOXS1O43638 330 aa18.35■□□□□ 0.53
PNKP-207ENST00000596014 MLYCDO95822 493 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms