RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 CHSY3Q70JA7 882 aa12.91□□□□□ -0.34
SHKBP1-208ENST00000595726 OR10Q1Q8NGQ4 319 aa12.91□□□□□ -0.34
SHKBP1-208ENST00000595726 OR9A4Q8NGU2 314 aa12.91□□□□□ -0.34
SHKBP1-208ENST00000595726 OR6P1Q8NGX9 317 aa12.91□□□□□ -0.34
SHKBP1-208ENST00000595726 GOT1L1Q8NHS2 421 aaPredicted RBP12.91□□□□□ -0.34
SHKBP1-208ENST00000595726 M1APQ8TC57 530 aa12.91□□□□□ -0.34
SHKBP1-208ENST00000595726 DRC3Q9H069 523 aa12.91□□□□□ -0.34
SHKBP1-208ENST00000595726 TP63Q9H3D4 680 aaPredicted RBP12.91□□□□□ -0.34
SHKBP1-208ENST00000595726 SLC24A3Q9HC58 644 aa12.91□□□□□ -0.34
SHKBP1-208ENST00000595726 TREX1Q9NSU2 369 aa12.91□□□□□ -0.34
SHKBP1-208ENST00000595726 SYBUQ9NX95 663 aa12.91□□□□□ -0.34
SHKBP1-208ENST00000595726 BFARQ9NZS9 450 aa12.91□□□□□ -0.34
SHKBP1-208ENST00000595726 NFS1Q9Y697 457 aa12.91□□□□□ -0.34
SHKBP1-208ENST00000595726 NDC80O14777 642 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 P2RX6O15547 441 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 PRMT3O60678 531 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 FKBP9O95302 570 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 RPN2P04844 631 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 MGAT1P26572 445 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 NMBRP28336 390 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 TPP2P29144 1249 aaPredicted RBP12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 BDKRB1P46663 353 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 NPY2RP49146 381 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 FNTAP49354 379 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 DEFB113Q30KQ7 82 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 FASTKD1Q53R41 847 aaKnown RBP12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 ANKRD22Q5VYY1 191 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 PRSS41Q7RTY9 318 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 KRTAP1-3Q8IUG1 177 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 KRT222Q8N1A0 295 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 KIF2BQ8N4N8 673 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 SLC5A8Q8N695 610 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 OR52N2Q8NGI0 321 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 OR5M3Q8NGP4 307 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 DEFB127Q9H1M4 99 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 MMP25Q9NPA2 562 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 CATSPERZQ9NTU4 200 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 CRIM1Q9NZV1 1036 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 PYCARDQ9ULZ3 195 aa12.9□□□□□ -0.34
SHKBP1-208ENST00000595726 IGKV1-8A0A0C4DH67 115 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 GOLGA6L10A0A0M3HER8 536 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 ARNTP27540 789 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 KIR2DL3P43628 341 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 ITGA8P53708 1063 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 EXT1Q16394 746 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 SFT2D3Q587I9 215 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 AARS2Q5JTZ9 985 aaKnown RBP12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 PAPD4Q6PIY7 484 aaKnown RBP12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 CAMKMTQ7Z624 323 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 RPS19BP1Q86WX3 136 aaKnown RBP12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 SULF2Q8IWU5 870 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 OR5M9Q8NGP3 310 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 ASZ1Q8WWH4 475 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 OR2A5Q96R48 311 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 TTC1Q99614 292 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 PLCD4Q9BRC7 762 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 KIFC1Q9BW19 673 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 ZNF395Q9H8N7 513 aaPredicted RBP12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 PNPLA3Q9NST1 481 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 MARCH4Q9P2E8 410 aaPredicted RBP12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 C19orf25Q9UFG5 118 aaPredicted RBP12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 ADAM21Q9UKJ8 722 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 SOX13Q9UN79 622 aa12.89□□□□□ -0.35
SHKBP1-208ENST00000595726 NPIPA2E9PIF3 369 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 NPIPA3F8WFD2 350 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 CD3EAPO15446 510 aaKnown RBP12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 AVILO75366 819 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 ATE1O95260 518 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 C1orf105O95561 183 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 TCP1P17987 556 aaKnown RBP12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 CMPK1P30085 196 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 SARNPP82979 210 aaKnown RBP12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 ACTN3Q08043 901 aaPredicted RBP12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 GXYLT1Q4G148 440 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 GARNL3Q5VVW2 1013 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 TTC23LQ6PF05 361 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 SUSD1Q6UWL2 747 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 CES3Q6UWW8 571 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 PAMR1Q6UXH9 720 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 ACAD11Q709F0 780 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 LDB1Q86U70 411 aaPredicted RBP12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 CAND1Q86VP6 1230 aaKnown RBP12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 PAQR7Q86WK9 346 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 PLD3Q8IV08 490 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 CIARTQ8N365 385 aaPredicted RBP12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 MPP5Q8N3R9 675 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 MYRIPQ8NFW9 859 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 OR51Q1Q8NH59 317 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 GRK7Q8WTQ7 553 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 RAD51AP1Q96B01 352 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 MFSD3Q96ES6 412 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 DMRT3Q9NQL9 472 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 HCN3Q9P1Z3 774 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 TSR3Q9UJK0 312 aaKnown RBP12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 ANAPC5Q9UJX4 755 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 EDARQ9UNE0 448 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 DNAJC13O75165 2243 aa12.88□□□□□ -0.35
SHKBP1-208ENST00000595726 ANK3Q12955 4377 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 ZNF407Q9C0G0 2248 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 A0A0G2JNJ9 132 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms