RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 SLC35G6P0C7Q6 338 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 CD46P15529 392 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 AGAP20933 346 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 MAGEA3P43357 314 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 SMSP52788 366 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 OLR1P78380 273 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 MEF2AQ02078 507 aaPredicted RBP15.37■□□□□ 0.05
LIG1-205ENST00000593425 OC90Q02509 493 aaPredicted RBP15.37■□□□□ 0.05
LIG1-205ENST00000593425 ACTN3Q08043 901 aaPredicted RBP15.37■□□□□ 0.05
LIG1-205ENST00000593425 NAE1Q13564 534 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 PHKG1Q16816 387 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 KRTCAP3Q53RY4 240 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 HSP90AA5PQ58FG0 334 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 ZNF468Q5VIY5 522 aaPredicted RBP15.37■□□□□ 0.05
LIG1-205ENST00000593425 LCTLQ6UWM7 567 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.37■□□□□ 0.05
LIG1-205ENST00000593425 LMNTD2Q8IXW0 634 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 KIF2BQ8N4N8 673 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 SLC5A8Q8N695 610 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 TMEM178AQ8NBL3 297 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 MFSD9Q8NBP5 474 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 MCUQ8NE86 351 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 MTFMTQ96DP5 389 aaKnown RBP15.37■□□□□ 0.05
LIG1-205ENST00000593425 SIGLEC10Q96LC7 697 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 OR1F2PQ96R84 312 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 SGPP1Q9BX95 441 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 CDCP1Q9H5V8 836 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 XAB2Q9HCS7 855 aaKnown RBP15.37■□□□□ 0.05
LIG1-205ENST00000593425 TRMT6Q9UJA5 497 aaKnown RBP15.37■□□□□ 0.05
LIG1-205ENST00000593425 SLC22A7Q9Y694 548 aa15.37■□□□□ 0.05
LIG1-205ENST00000593425 MAGEB17A8MXT2 336 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 CLDN14O95500 239 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 MLYCDO95822 493 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 C8GP07360 202 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 SP1P08047 785 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 NPPBP16860 134 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 KIR3DL1P43629 444 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 OR4D2P58180 307 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 SLC25A25Q6KCM7 469 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 LRRC8EQ6NSJ5 796 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 ZNF662Q6ZS27 426 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 CHERPQ8IWX8 916 aaKnown RBP15.36■□□□□ 0.05
LIG1-205ENST00000593425 AFAP1L2Q8N4X5 818 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 ZNF740Q8NDX6 193 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 CALML6Q8TD86 181 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 ELP5Q8TE02 316 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 TRIM51Q9BSJ1 452 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 PARVBQ9HBI1 364 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 IARS2Q9NSE4 1012 aaKnown RBP15.36■□□□□ 0.05
LIG1-205ENST00000593425 LRFN1Q9P244 771 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 NEU2Q9Y3R4 380 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 MAD1L1Q9Y6D9 718 aa15.36■□□□□ 0.05
LIG1-205ENST00000593425 PKDREJQ9NTG1 2253 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 NDUFS4O43181 175 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 ASNA1O43681 348 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 GALR3O60755 368 aaPredicted RBP15.35■□□□□ 0.05
LIG1-205ENST00000593425 FHP07954 510 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 IL10P22301 178 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 GRK3P35626 688 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 TAS2R50P59544 299 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 KRTAP10-9P60411 292 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 DHX9Q08211 1270 aaKnown RBP15.35■□□□□ 0.05
LIG1-205ENST00000593425 SP140Q13342 867 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 RNFT1Q5M7Z0 435 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 RBM20Q5T481 1227 aaKnown RBP15.35■□□□□ 0.05
LIG1-205ENST00000593425 PAQR3Q6TCH7 311 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 ZNF227Q86WZ6 799 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 LGI4Q8N135 537 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 NAT8LQ8N9F0 302 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.35■□□□□ 0.05
LIG1-205ENST00000593425 FAM98AQ8NCA5 519 aaKnown RBP15.35■□□□□ 0.05
LIG1-205ENST00000593425 TRIM58Q8NG06 486 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 AGAP11Q8TF27 550 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 PYCR2Q96C36 320 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 FAM167BQ9BTA0 163 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 SPNS1Q9H2V7 528 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 ITGB1BP2Q9UKP3 347 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 CACNA1CQ13936 2221 aa15.35■□□□□ 0.05
LIG1-205ENST00000593425 NDC80O14777 642 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 CHST10O43529 356 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 SLC25A12O75746 678 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 CCDC175P0C221 793 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 ABOP16442 354 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 ALOX12P18054 663 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 CCND1P24385 295 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 GABRB3P28472 473 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 TPP2P29144 1249 aaPredicted RBP15.34■□□□□ 0.05
LIG1-205ENST00000593425 RGS4P49798 205 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 HERC3Q15034 1050 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 MAPKAPK3Q16644 382 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 DEFB134Q4QY38 66 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 UGT3A1Q6NUS8 523 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 C3P1Q6ZMU1 363 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 FGD2Q7Z6J4 655 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 RPS19BP1Q86WX3 136 aaKnown RBP15.34■□□□□ 0.05
LIG1-205ENST00000593425 MYO1HQ8N1T3 1032 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 GHDCQ8N2G8 530 aa15.34■□□□□ 0.05
LIG1-205ENST00000593425 CPSF7Q8N684 471 aaKnown RBP15.34■□□□□ 0.05
LIG1-205ENST00000593425 C2CD4AQ8NCU7 369 aaPredicted RBP15.34■□□□□ 0.05
LIG1-205ENST00000593425 ABHD11Q8NFV4 315 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms