RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 WDCPQ9H6R7 721 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 ZNF226Q9NYT6 803 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 ELF5Q9UKW6 265 aaPredicted RBP14.66□□□□□ -0.06
CIRBP-228ENST00000590347 TRAPPC4Q9Y296 219 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 TIMM13Q9Y5L4 95 aaPredicted RBP14.66□□□□□ -0.06
CIRBP-228ENST00000590347 INMT-MINDY4F8WBC2 141 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 MUSKO15146 869 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 NBNO60934 754 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 SLC25A27O95847 323 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 FABP3P05413 133 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 FPR1P21462 350 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 CPN2P22792 545 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 AKAP5P24588 427 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 AGFG1P52594 562 aaKnown RBP14.66□□□□□ -0.06
CIRBP-228ENST00000590347 IL18Q14116 193 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 TTLL4Q14679 1199 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 LCN1P1Q5VSP4 162 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 OVOS1Q6IE37 1185 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 ATRAIDQ6UW56 229 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 ZFP41Q8N8Y5 198 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 RBPMSQ93062 196 aaKnown RBP14.66□□□□□ -0.06
CIRBP-228ENST00000590347 MAL2Q969L2 176 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 HHATLQ9HCP6 504 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 GPRC5BQ9NZH0 403 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 RCOR3Q9P2K3 495 aaPredicted RBP14.66□□□□□ -0.06
CIRBP-228ENST00000590347 PCTPQ9UKL6 214 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 XIRP2A4UGR9 3374 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 ZNF98A6NK75 572 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 SH3BGRLO75368 114 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 CLCNKAP51800 687 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 GRIK2Q13002 908 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 DGKKQ5KSL6 1271 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 SIDT2Q8NBJ9 832 aaKnown RBP14.65□□□□□ -0.06
CIRBP-228ENST00000590347 OR7D4Q8NG98 312 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 OR8K3Q8NH51 312 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.65□□□□□ -0.06
CIRBP-228ENST00000590347 GIMAP5Q96F15 307 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 MYO19Q96H55 970 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 ZBTB18Q99592 522 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 SPATA2Q9UM82 520 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 LAMA2P24043 3122 aaKnown RBP14.65□□□□□ -0.06
CIRBP-228ENST00000590347 SCN4AP35499 1836 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 PARP14Q460N5 1801 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 RPS10-NUDT3A0A1W2PQS6 291 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 ANXA9O76027 345 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 RETP07949 1114 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 NUDT7P0C024 238 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 HAPLN1P10915 354 aaPredicted RBP14.65□□□□□ -0.06
CIRBP-228ENST00000590347 SLC2A3P11169 496 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 CACNB2Q08289 660 aaPredicted RBP14.65□□□□□ -0.06
CIRBP-228ENST00000590347 FGL2Q14314 439 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 HKDC1Q2TB90 917 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 SUSD1Q6UWL2 747 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 KRT73Q86Y46 540 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 GPRC5AQ8NFJ5 357 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 OR8J3Q8NGG0 315 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 OPALINQ96PE5 141 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 ZIC5Q96T25 663 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 DNAJC27Q9NZQ0 273 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 COPS3Q9UNS2 423 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 HTTP42858 3142 aa14.65□□□□□ -0.06
CIRBP-228ENST00000590347 SLC35F4A4IF30 521 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 SDC2P34741 201 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 TPMTP51580 245 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 CTBP2P56545 445 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 DSG2Q14126 1118 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 KIAA1841Q6NSI8 718 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 ZSWIM9Q86XI8 627 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 BMPERQ8N8U9 685 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 OR4F6Q8NGB9 312 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 SPPL2AQ8TCT8 520 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 FUBP1Q96AE4 644 aaKnown RBP14.64□□□□□ -0.07
CIRBP-228ENST00000590347 MS4A3Q96HJ5 214 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 C12orf57Q99622 126 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 RHCGQ9UBD6 479 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 FAM8A1Q9UBU6 413 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 PAPPA2Q9BXP8 1791 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 MRPS14O60783 128 aaKnown RBP14.64□□□□□ -0.07
CIRBP-228ENST00000590347 NIPSNAP2O75323 286 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 RAF1P04049 648 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 LGALS2P05162 132 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 IGFBP1P08833 259 aaPredicted RBP14.64□□□□□ -0.07
CIRBP-228ENST00000590347 ACSM4P0C7M7 580 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 HLA-DMAP28067 261 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 CSKP41240 450 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 SPATS1Q496A3 300 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 GLYR1Q49A26 553 aaPredicted RBP14.64□□□□□ -0.07
CIRBP-228ENST00000590347 INO80DQ53TQ3 878 aaPredicted RBP14.64□□□□□ -0.07
CIRBP-228ENST00000590347 RANBP10Q6VN20 620 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 FAM92BQ6ZTR7 304 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 PDZD3Q86UT5 571 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 BBS7Q8IWZ6 715 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 TSPEARQ8WU66 669 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 HYLS1Q96M11 299 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 CCDC115Q96NT0 180 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 FZD8Q9H461 694 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 C11orf16Q9NQ32 467 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 MYO10Q9HD67 2058 aa14.64□□□□□ -0.07
CIRBP-228ENST00000590347 DNAJC25-GNG10A0A024R161 153 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms