RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 MACROD1Q9BQ69 325 aa13.48□□□□□ -0.25
CCDC130-208ENST00000588071 SIKE1Q9BRV8 207 aa13.48□□□□□ -0.25
CCDC130-208ENST00000588071 CENPKQ9BS16 269 aa13.48□□□□□ -0.25
CCDC130-208ENST00000588071 EPN3Q9H201 632 aa13.48□□□□□ -0.25
CCDC130-208ENST00000588071 TUBB1Q9H4B7 451 aa13.48□□□□□ -0.25
CCDC130-208ENST00000588071 DMRT3Q9NQL9 472 aa13.48□□□□□ -0.25
CCDC130-208ENST00000588071 STARD5Q9NSY2 213 aa13.48□□□□□ -0.25
CCDC130-208ENST00000588071 RIC8BQ9NVN3 520 aa13.48□□□□□ -0.25
CCDC130-208ENST00000588071 OCIAD1Q9NX40 245 aa13.48□□□□□ -0.25
CCDC130-208ENST00000588071 PSD3Q9NYI0 1048 aa13.48□□□□□ -0.25
CCDC130-208ENST00000588071 AHSPQ9NZD4 102 aa13.48□□□□□ -0.25
CCDC130-208ENST00000588071 DCTN4Q9UJW0 460 aa13.48□□□□□ -0.25
CCDC130-208ENST00000588071 PTGDR2Q9Y5Y4 395 aa13.48□□□□□ -0.25
CCDC130-208ENST00000588071 LRIT2A6NDA9 550 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 ZSCAN9O15535 394 aaPredicted RBP13.47□□□□□ -0.25
CCDC130-208ENST00000588071 DIAPH2O60879 1101 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 OR2B3O76000 313 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 GABRA4P48169 554 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 AQP5P55064 265 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 HMGCS1Q01581 520 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 TGM3Q08188 693 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 TUBB3Q13509 450 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 TOR1AIP1Q5JTV8 583 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 VWA5B1Q5TIE3 1220 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 RNF165Q6ZSG1 346 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 BPHLQ86WA6 291 aaPredicted RBP13.47□□□□□ -0.25
CCDC130-208ENST00000588071 TMPRSS12Q86WS5 348 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 TTC29Q8NA56 475 aaPredicted RBP13.47□□□□□ -0.25
CCDC130-208ENST00000588071 TUBGCP3Q96CW5 907 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 F2RL3Q96RI0 385 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 MS4A8Q9BY19 250 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 ACPTQ9BZG2 426 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 REXO4Q9GZR2 422 aaKnown RBP13.47□□□□□ -0.25
CCDC130-208ENST00000588071 SPRTNQ9H040 489 aaPredicted RBP13.47□□□□□ -0.25
CCDC130-208ENST00000588071 OR51B5Q9H339 312 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 RABEP2Q9H5N1 569 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 SYNPO2LQ9H987 977 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 MEAF6Q9HAF1 191 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 FGF21Q9NSA1 209 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 VPS29Q9UBQ0 182 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 RARRES3Q9UL19 164 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 PPT2Q9UMR5 302 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 PTPRBP23467 1997 aa13.47□□□□□ -0.25
CCDC130-208ENST00000588071 A0A0G2JND7 137 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 ATP6AP2A0A1C7CYW4 349 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 SRRM3A6NNA2 597 aaPredicted RBP13.46□□□□□ -0.25
CCDC130-208ENST00000588071 SAP18O00422 153 aaKnown RBP13.46□□□□□ -0.25
CCDC130-208ENST00000588071 ZNF195O14628 629 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 P2RX6O15547 441 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 SHOX2O60902 331 aaPredicted RBP13.46□□□□□ -0.25
CCDC130-208ENST00000588071 VPS4BO75351 444 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 SEC22BO75396 215 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 ATP6AP2O75787 350 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 JUNP05412 331 aaKnown RBP13.46□□□□□ -0.25
CCDC130-208ENST00000588071 MSL3P1P0C860 447 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 DRD4P21917 467 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 RAP1GDS1P52306 607 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 ITGA1P56199 1179 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 CUL3Q13618 768 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 GRM7Q14831 915 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 NR6A1Q15406 480 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 NDUFA9Q16795 377 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 HKDC1Q2TB90 917 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 GALNTL6Q49A17 601 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 TMEM35AQ53FP2 167 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 DEPDC1Q5TB30 811 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 KHDRBS2Q5VWX1 349 aaKnown RBP13.46□□□□□ -0.25
CCDC130-208ENST00000588071 NXNQ6DKJ4 435 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 TLDC1Q6P9B6 456 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 EPGNQ6UW88 154 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 ACAD11Q709F0 780 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 RAB11FIP2Q7L804 512 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 KCT2Q8NC54 265 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 SRFBP1Q8NEF9 429 aaKnown RBP13.46□□□□□ -0.25
CCDC130-208ENST00000588071 OR8K5Q8NH50 307 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 OR1L3Q8NH93 324 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 RFWD2Q8NHY2 731 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 RGMAQ96B86 450 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 ZNF501Q96CX3 271 aaPredicted RBP13.46□□□□□ -0.25
CCDC130-208ENST00000588071 LIN37Q96GY3 246 aaPredicted RBP13.46□□□□□ -0.25
CCDC130-208ENST00000588071 C3orf30Q96M34 536 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 ELAC2Q9BQ52 826 aaKnown RBP13.46□□□□□ -0.25
CCDC130-208ENST00000588071 SLC7A5P2Q9GIP4 190 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 KLHL31Q9H511 634 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 SLC39A1Q9NY26 324 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 KLHL14Q9P2G3 628 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 RUVBL1Q9Y265 456 aaKnown RBP13.46□□□□□ -0.25
CCDC130-208ENST00000588071 LOXL2Q9Y4K0 774 aa13.46□□□□□ -0.25
CCDC130-208ENST00000588071 CCDC187A0A096LP49 1063 aa13.45□□□□□ -0.26
CCDC130-208ENST00000588071 GOLGA8QA0A0J9YX86 632 aa13.45□□□□□ -0.26
CCDC130-208ENST00000588071 HYKKA2RU49 373 aa13.45□□□□□ -0.26
CCDC130-208ENST00000588071 GOLGA8OA6NCC3 632 aa13.45□□□□□ -0.26
CCDC130-208ENST00000588071 GOLGA8NF8WBI6 632 aa13.45□□□□□ -0.26
CCDC130-208ENST00000588071 POLR1CO15160 346 aaPredicted RBP13.45□□□□□ -0.26
CCDC130-208ENST00000588071 RSL1D1O76021 490 aaKnown RBP13.45□□□□□ -0.26
CCDC130-208ENST00000588071 MYO1DO94832 1006 aa13.45□□□□□ -0.26
CCDC130-208ENST00000588071 ETHE1O95571 254 aa13.45□□□□□ -0.26
CCDC130-208ENST00000588071 CTSBP07858 339 aa13.45□□□□□ -0.26
CCDC130-208ENST00000588071 JMJD7P0C870 316 aa13.45□□□□□ -0.26
CCDC130-208ENST00000588071 CCL4P13236 92 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms