RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 DNAJC8O75937 253 aaPredicted RBP12.11□□□□□ -0.47
VMP1-202ENST00000585847 MYO1DO94832 1006 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 CPNE6O95741 557 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 TSPAN8P19075 237 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 PSMB5P28074 263 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 PRDX3P30048 256 aaKnown RBP12.11□□□□□ -0.47
VMP1-202ENST00000585847 CLNS1AP54105 237 aaKnown RBP12.11□□□□□ -0.47
VMP1-202ENST00000585847 FOXA1P55317 472 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 KLF10Q13118 480 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 DOC2AQ14183 400 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 RPS6KA2Q15349 733 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 CPSF6Q16630 551 aaKnown RBP eCLIP12.11□□□□□ -0.47
VMP1-202ENST00000585847 DPY19L1Q2PZI1 675 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 FBXO48Q5FWF7 155 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 C6orf136Q5SQH8 315 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 ICE2Q659A1 982 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 TMEM71Q6P5X7 295 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 WDR74Q6RFH5 385 aaPredicted RBP12.11□□□□□ -0.47
VMP1-202ENST00000585847 TMPRSS11BQ86T26 416 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 OOSP2Q86WS3 158 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 MARCH9Q86YJ5 346 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 FAM20CQ8IXL6 584 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 OR4K1Q8NGD4 311 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 DNAJB8Q8NHS0 232 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 WDR20Q8TBZ3 569 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 NEIL2Q969S2 332 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 ESAMQ96AP7 390 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 PYCR2Q96C36 320 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 THAP11Q96EK4 314 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 QRFPRQ96P65 431 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 RAB3IPQ96QF0 476 aaPredicted RBP12.11□□□□□ -0.47
VMP1-202ENST00000585847 OR4K3Q96R72 315 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 GFM1Q96RP9 751 aaKnown RBP12.11□□□□□ -0.47
VMP1-202ENST00000585847 SERPINI1Q99574 410 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 ZBTB18Q99592 522 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 RHBGQ9H310 441 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 TUBB1Q9H4B7 451 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 TNFRSF12AQ9NP84 129 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 TMEM184CQ9NVA4 438 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 AIG1Q9NVV5 245 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 AHSPQ9NZD4 102 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 POMT2Q9UKY4 750 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 SNX7Q9UNH6 387 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 RNF11Q9Y3C5 154 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 FIS1Q9Y3D6 152 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 KNTC1P50748 2209 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 IGHV5-10-1A0A0J9YXX1 117 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 A0A1W2PNU3 283 aaPredicted RBP12.1□□□□□ -0.47
VMP1-202ENST00000585847 PIPSLA2A3N6 862 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 PSMD12O00232 456 aaPredicted RBP12.1□□□□□ -0.47
VMP1-202ENST00000585847 MT-CO3P00414 261 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 JUNP05412 331 aaKnown RBP12.1□□□□□ -0.47
VMP1-202ENST00000585847 LINC00032P0C843 101 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 UGT2B7P16662 529 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 JAK1P23458 1154 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 PTPN4P29074 926 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 RPL3P39023 403 aaKnown RBP12.1□□□□□ -0.47
VMP1-202ENST00000585847 TSFMP43897 325 aaKnown RBP12.1□□□□□ -0.47
VMP1-202ENST00000585847 SCTRP47872 440 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 C21orf58P58505 322 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 REEP5Q00765 189 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 LRRC74AQ0VAA2 488 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 CUL3Q13618 768 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 SPIDRQ14159 915 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 CLPPQ16740 277 aaPredicted RBP12.1□□□□□ -0.47
VMP1-202ENST00000585847 SLC5A12Q1EHB4 618 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 SPATS1Q496A3 300 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 HES3Q5TGS1 186 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 GALNT18Q6P9A2 607 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 FOXR1Q6PIV2 292 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 SUSD1Q6UWL2 747 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 TMIGD1Q6UXZ0 262 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 RPS27LQ71UM5 84 aaKnown RBP12.1□□□□□ -0.47
VMP1-202ENST00000585847 ARHGAP22Q7Z5H3 698 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 TRIM73Q86UV7 250 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 PROSER1Q86XN7 944 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 FAM129CQ86XR2 697 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 FNDC5Q8NAU1 212 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 OR4D9Q8NGE8 314 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 OR2A1Q8NGT9 310 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 AHCYL2Q96HN2 611 aaKnown RBP12.1□□□□□ -0.47
VMP1-202ENST00000585847 FCRL1Q96LA6 429 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 CDK15Q96Q40 435 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 KCNA7Q96RP8 456 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 MAP3K3Q99759 626 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 SYNDIG1Q9H7V2 258 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 LRTM1Q9HBL6 345 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 GEMIN8Q9NWZ8 242 aaKnown RBP12.1□□□□□ -0.47
VMP1-202ENST00000585847 VPS29Q9UBQ0 182 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 SH2B3Q9UQQ2 575 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 RUVBL1Q9Y265 456 aaKnown RBP12.1□□□□□ -0.47
VMP1-202ENST00000585847 CCL27Q9Y4X3 112 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 TIMM22Q9Y584 194 aa12.1□□□□□ -0.47
VMP1-202ENST00000585847 COPG1Q9Y678 874 aaKnown RBP12.1□□□□□ -0.47
VMP1-202ENST00000585847 MDC1Q14676 2089 aaKnown RBP12.09□□□□□ -0.47
VMP1-202ENST00000585847 IGHV5-51A0A0C4DH38 117 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 TRBC2A0A5B9 178 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 C2orf74A8MZ97 194 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 PRAMEF10O60809 474 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 NPPAP01160 153 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms