RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ADAM21Q9UKJ8 722 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 PPT2Q9UMR5 302 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 LOXL2Q9Y4K0 774 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 CACNA1AO00555 2505 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 B4E171 279 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 RGS14O43566 566 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 HCRTR1O43613 425 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 TGFB1P01137 390 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 JMJD7P0C870 316 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 TROVE2P10155 538 aaKnown RBP eCLIP17.47■□□□□ 0.39
RFFL-211ENST00000584541 TSPAN7P41732 249 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 MC2RQ01718 297 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 TGM3Q08188 693 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 PUM1Q14671 1186 aaKnown RBP eCLIP17.47■□□□□ 0.39
RFFL-211ENST00000584541 GRM7Q14831 915 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 TLDC1Q6P9B6 456 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 SCIMPQ6UWF3 145 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 VN1R5Q7Z5H4 357 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 LRRC34Q8IZ02 419 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 ZNF285Q96NJ3 590 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 ZNF317Q96PQ6 595 aaPredicted RBP17.47■□□□□ 0.39
RFFL-211ENST00000584541 HBEGFQ99075 208 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 MS4A8Q9BY19 250 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 NSRP1Q9H0G5 558 aaKnown RBP17.47■□□□□ 0.39
RFFL-211ENST00000584541 RIC8BQ9NVN3 520 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 KIF26BQ2KJY2 2108 aa17.47■□□□□ 0.39
RFFL-211ENST00000584541 GMNCA6NCL1 334 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 PIP5K1BO14986 540 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 POLR1CO15160 346 aaPredicted RBP17.46■□□□□ 0.39
RFFL-211ENST00000584541 TGDSO95455 350 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 STATHP02808 62 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 LINC00032P0C843 101 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 BTKQ06187 659 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 TARDBPQ13148 414 aaKnown RBP eCLIP17.46■□□□□ 0.392e-6■■■■□ 22.6
RFFL-211ENST00000584541 CUL3Q13618 768 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 NDUFA9Q16795 377 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 TMEM35AQ53FP2 167 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 TOR1AIP1Q5JTV8 583 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 TRIM46Q7Z4K8 759 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 PPP1R3BQ86XI6 285 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 RNF175Q8N4F7 328 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 SRFBP1Q8NEF9 429 aaKnown RBP17.46■□□□□ 0.39
RFFL-211ENST00000584541 OR1L3Q8NH93 324 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 WDR36Q8NI36 951 aaKnown RBP17.46■□□□□ 0.39
RFFL-211ENST00000584541 C19orf60Q96EN9 201 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 TRIM55Q9BYV6 548 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 NUF2Q9BZD4 464 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 SLC7A5P2Q9GIP4 190 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 SYNPO2LQ9H987 977 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 FBXO8Q9NRD0 319 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 SLC39A1Q9NY26 324 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 AHSPQ9NZD4 102 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 VPS29Q9UBQ0 182 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 SLC12A4Q9UP95 1085 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 USH1CQ9Y6N9 552 aa17.46■□□□□ 0.39
RFFL-211ENST00000584541 LRIT2A6NDA9 550 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 PLD2O14939 933 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 P2RX6O15547 441 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 FGF5P12034 268 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 CCL4P13236 92 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 RAP1GDS1P52306 607 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 EMP3P54852 163 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 RAB15P59190 212 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 HKDC1Q2TB90 917 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 PRTGQ2VWP7 1150 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 FAM214AQ32MH5 1076 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 SPDYAQ5MJ70 313 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 DEPDC1Q5TB30 811 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 YOD1Q5VVQ6 348 aaPredicted RBP17.45■□□□□ 0.38
RFFL-211ENST00000584541 GARNL3Q5VVW2 1013 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 KHDRBS2Q5VWX1 349 aaKnown RBP17.45■□□□□ 0.38
RFFL-211ENST00000584541 FAM219BQ5XKK7 198 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 TRIM40Q6P9F5 258 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 ABHD13Q7L211 337 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 TMPRSS7Q7RTY8 843 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 BMPERQ8N8U9 685 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 MACROD1Q9BQ69 325 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 SIKE1Q9BRV8 207 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 NDC1Q9BTX1 674 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 ACPTQ9BZG2 426 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 SLC6A16Q9GZN6 736 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 REXO4Q9GZR2 422 aaKnown RBP17.45■□□□□ 0.38
RFFL-211ENST00000584541 SPRTNQ9H040 489 aaPredicted RBP17.45■□□□□ 0.38
RFFL-211ENST00000584541 OR51B5Q9H339 312 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 TUBB1Q9H4B7 451 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 STARD5Q9NSY2 213 aa17.45■□□□□ 0.38
RFFL-211ENST00000584541 RUVBL1Q9Y265 456 aaKnown RBP17.45■□□□□ 0.38
RFFL-211ENST00000584541 A0A088AWK7 358 aa17.44■□□□□ 0.38
RFFL-211ENST00000584541 HYKKA2RU49 373 aa17.44■□□□□ 0.38
RFFL-211ENST00000584541 FITM1A5D6W6 292 aa17.44■□□□□ 0.38
RFFL-211ENST00000584541 VPS4BO75351 444 aa17.44■□□□□ 0.38
RFFL-211ENST00000584541 SH3BGRLO75368 114 aa17.44■□□□□ 0.38
RFFL-211ENST00000584541 RSL1D1O76021 490 aaKnown RBP17.44■□□□□ 0.38
RFFL-211ENST00000584541 SEMA3DO95025 777 aa17.44■□□□□ 0.38
RFFL-211ENST00000584541 ZNF10P21506 573 aaPredicted RBP17.44■□□□□ 0.38
RFFL-211ENST00000584541 MAPK10P53779 464 aa17.44■□□□□ 0.38
RFFL-211ENST00000584541 ARSFP54793 590 aa17.44■□□□□ 0.38
RFFL-211ENST00000584541 SKP1P63208 163 aa17.44■□□□□ 0.38
RFFL-211ENST00000584541 NR6A1Q15406 480 aa17.44■□□□□ 0.38
RFFL-211ENST00000584541 C3orf38Q5JPI3 329 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms