RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 NNMTP40261 264 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 FKBP3Q00688 224 aaKnown RBP3.12□□□□□ -1.91
COPS3-217ENST00000583160 ALDH1L2Q3SY69 923 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 OR4C11Q6IEV9 310 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 MZT2BQ6NZ67 158 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 CYB5D1Q6P9G0 228 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 CERS3Q8IU89 383 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 GBP7Q8N8V2 638 aaPredicted RBP3.12□□□□□ -1.91
COPS3-217ENST00000583160 LRTM2Q8N967 370 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.12□□□□□ -1.91
COPS3-217ENST00000583160 ROBO4Q8WZ75 1007 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 OTUB1Q96FW1 271 aaPredicted RBP3.12□□□□□ -1.91
COPS3-217ENST00000583160 MUS81Q96NY9 551 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 PI4K2AQ9BTU6 479 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 TBC1D13Q9NVG8 400 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 CDC42BPAQ5VT25 1732 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 ABCC1P33527 1531 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 FAM135AQ9P2D6 1515 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 DIP2CQ9Y2E4 1556 aa3.12□□□□□ -1.91
COPS3-217ENST00000583160 NPATQ14207 1427 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 CNTLNQ9NXG0 1405 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 C3P01024 1663 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 ITSN2Q9NZM3 1697 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 CDK13Q14004 1512 aaKnown RBP3.11□□□□□ -1.91
COPS3-217ENST00000583160 MTMR11A4FU01 709 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 ZNF840PA6NDX5 716 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 GLTPD2A6NH11 291 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 CLDN4O14493 209 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 TRAFD1O14545 582 aaPredicted RBP3.11□□□□□ -1.91
COPS3-217ENST00000583160 CYTIPO60759 359 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 PCP11498 1178 aaKnown RBP3.11□□□□□ -1.91
COPS3-217ENST00000583160 NDST2P52849 883 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 ERVK-16P61578 105 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 SNTB1Q13884 538 aaKnown RBP3.11□□□□□ -1.91
COPS3-217ENST00000583160 SPATA1Q5VX52 437 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 CENPVQ7Z7K6 275 aaPredicted RBP3.11□□□□□ -1.91
COPS3-217ENST00000583160 RNF130Q86XS8 419 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 NSMAFQ92636 917 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 LINC00615Q96LM1 132 aaPredicted RBP3.11□□□□□ -1.91
COPS3-217ENST00000583160 SDCBP2Q9H190 292 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 ACTL8Q9H568 366 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 TRPV2Q9Y5S1 764 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 PLXNC1O60486 1568 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 ABCA6Q8N139 1617 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 LTBP4Q8N2S1 1624 aa3.11□□□□□ -1.91
COPS3-217ENST00000583160 ZNF142P52746 1687 aaPredicted RBP3.11□□□□□ -1.91
COPS3-217ENST00000583160 TRAPPC8Q9Y2L5 1435 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 FYCO1Q9BQS8 1478 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 A0A087WWV3 80 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 IGHV3-20A0A0C4DH32 117 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 AP5Z1O43299 807 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 SELEP16581 610 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 EEF1B2P24534 225 aaKnown RBP3.1□□□□□ -1.91
COPS3-217ENST00000583160 EDNRAP25101 427 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 ATP4BP51164 291 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 LIMK1P53667 647 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 OR1D5P58170 312 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 ILF2Q12905 390 aaKnown RBP3.1□□□□□ -1.91
COPS3-217ENST00000583160 DUSP5Q16690 384 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 FGD3Q5JSP0 725 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 ATP1A1-AS1Q5TC04 95 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 VITQ6UXI7 678 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 IQCHQ86VS3 1027 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 GPD1LQ8N335 351 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 NDNQ99608 321 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 UBAC1Q9BSL1 405 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 JPT2Q9H910 190 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 RAVER2Q9HCJ3 691 aaKnown RBP3.1□□□□□ -1.91
COPS3-217ENST00000583160 IL36AQ9UHA7 158 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 IL16Q14005 1332 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 RTEL1-TNFRSF6BF6WH68 1400 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 CLIP1P30622 1438 aa3.1□□□□□ -1.91
COPS3-217ENST00000583160 PLA2R1Q13018 1463 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 PLEKHH2Q8IVE3 1493 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 GPATCH8Q9UKJ3 1502 aaKnown RBP3.09□□□□□ -1.91
COPS3-217ENST00000583160 SPATA31D1Q6ZQQ2 1576 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 SAMD9LQ8IVG5 1584 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 INO80Q9ULG1 1556 aaPredicted RBP3.09□□□□□ -1.91
COPS3-217ENST00000583160 OGTO15294 1046 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 AHCYL1O43865 530 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 SAP30O75446 220 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 CELF2O95319 508 aaKnown RBP3.09□□□□□ -1.91
COPS3-217ENST00000583160 SERPING1P05155 500 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 SFTPDP35247 375 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 CSE1LP55060 971 aaKnown RBP3.09□□□□□ -1.91
COPS3-217ENST00000583160 NDUFV3P56181 108 aaKnown RBP3.09□□□□□ -1.91
COPS3-217ENST00000583160 RBPJQ06330 500 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 ACSM1Q08AH1 577 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 RALGDSQ12967 914 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 ALCAMQ13740 583 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 KIAA0141Q14154 515 aaPredicted RBP3.09□□□□□ -1.91
COPS3-217ENST00000583160 C3AR1Q16581 482 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 FAM106AQ4KMX7 169 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 CPEB2Q7Z5Q1 589 aaKnown RBP3.09□□□□□ -1.91
COPS3-217ENST00000583160 ADCK1Q86TW2 530 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 CATSPER3Q86XQ3 398 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 ANKRD13CQ8N6S4 541 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 OR4C15Q8NGM1 316 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 SPPL2AQ8TCT8 520 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 SSC4DQ8WTU2 575 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms