RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 SNX19Q92543 992 aa16.85■□□□□ 0.29
TMCO1-207ENST00000580248 ERLEC1Q96DZ1 483 aa16.85■□□□□ 0.29
TMCO1-207ENST00000580248 MTERF3Q96E29 417 aa16.85■□□□□ 0.29
TMCO1-207ENST00000580248 OSBPL10Q9BXB5 764 aa16.85■□□□□ 0.29
TMCO1-207ENST00000580248 GRIP2Q9C0E4 1043 aa16.85■□□□□ 0.29
TMCO1-207ENST00000580248 PCBD2Q9H0N5 130 aa16.85■□□□□ 0.29
TMCO1-207ENST00000580248 CARS2Q9HA77 564 aaKnown RBP16.85■□□□□ 0.29
TMCO1-207ENST00000580248 SPATA7Q9P0W8 599 aa16.85■□□□□ 0.29
TMCO1-207ENST00000580248 ZNF282Q9UDV7 671 aaPredicted RBP16.85■□□□□ 0.29
TMCO1-207ENST00000580248 TMEM98Q9Y2Y6 226 aa16.85■□□□□ 0.29
TMCO1-207ENST00000580248 CKAP5Q14008 2032 aa16.85■□□□□ 0.29
TMCO1-207ENST00000580248 GNG14A0A1W2PPG7 69 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 IGLON5A6NGN9 336 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 FAM170BA6NMN3 283 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 ALPLP05186 524 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 ABCB1P08183 1280 aaPredicted RBP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 LAMP1P11279 417 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 MYCLP1P12525 358 aaPredicted RBP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 FZD5Q13467 585 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 UBXN2BQ14CS0 331 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 CYP2A13Q16696 494 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 AGBL4Q5VU57 503 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 METRNLQ641Q3 311 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 FAM83HQ6ZRV2 1179 aaPredicted RBP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 CLEC4FQ8N1N0 589 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 METTL25Q8N6Q8 603 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 FAM86B1Q8N7N1 296 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 ADAMTS16Q8TE57 1224 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 TFGQ92734 400 aaPredicted RBP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 RBM4BQ9BQ04 359 aaKnown RBP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 RBM4Q9BWF3 364 aaKnown RBP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 TEX101Q9BY14 249 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 REEP4Q9H6H4 257 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 PELI2Q9HAT8 420 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 VCX3AQ9NNX9 186 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 PAPOLBQ9NRJ5 636 aaKnown RBP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 MMP17Q9ULZ9 603 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 VPS4AQ9UN37 437 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 MID1O15344 667 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 PCDH8O95206 1070 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 KCNK5O95279 499 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 CPSF4O95639 269 aaKnown RBP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 PCCBP05166 539 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 THRBP10828 461 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 COL9A1P20849 921 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 CXCR2P25025 360 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 PTX3P26022 381 aaPredicted RBP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 SERPINB1P30740 379 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 MAGEA2P43356 314 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 ALDH3B2P48448 385 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 TAS2R38P59533 333 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 NKG7Q16617 165 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 WSCD2Q2TBF2 565 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 THEMIS2Q5TEJ8 643 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 TTC23Q5W5X9 447 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 SLC30A9Q6PML9 568 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 TBPL2Q6SJ96 375 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 STK32CQ86UX6 486 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 HIPK1Q86Z02 1210 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 ZZZ3Q8IYH5 903 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 METTL4Q8N3J2 472 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 OR5K2Q8NHB8 316 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 GOT1L1Q8NHS2 421 aaPredicted RBP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 CDC26Q8NHZ8 85 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 PITHD1Q9GZP4 211 aaPredicted RBP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 MYNNQ9NPC7 610 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 AHSPQ9NZD4 102 aa16.84■□□□□ 0.29
TMCO1-207ENST00000580248 IFT80Q9P2H3 777 aaPredicted RBP16.84■□□□□ 0.29
TMCO1-207ENST00000580248 CHURC1-FNTBB4DL54 471 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 SNAP29O95721 258 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 PEX19P40855 299 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 VAC14Q08AM6 782 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 TSTA3Q13630 321 aaPredicted RBP16.83■□□□□ 0.28
TMCO1-207ENST00000580248 RBBP5Q15291 538 aaKnown RBP16.83■□□□□ 0.28
TMCO1-207ENST00000580248 HKDC1Q2TB90 917 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 OTUD3Q5T2D3 398 aaPredicted RBP16.83■□□□□ 0.28
TMCO1-207ENST00000580248 ZNF776Q68DI1 518 aaPredicted RBP16.83■□□□□ 0.28
TMCO1-207ENST00000580248 ZCCHC8Q6NZY4 707 aaKnown RBP16.83■□□□□ 0.28
TMCO1-207ENST00000580248 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.83■□□□□ 0.28
TMCO1-207ENST00000580248 RBM44Q6ZP01 1051 aaKnown RBP16.83■□□□□ 0.28
TMCO1-207ENST00000580248 Q6ZS52 159 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 IKBIPQ70UQ0 350 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 C10orf111Q8N326 155 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 ZNF786Q8N393 782 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 SH3KBP1Q96B97 665 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 NECAB3Q96P71 396 aaPredicted RBP16.83■□□□□ 0.28
TMCO1-207ENST00000580248 FOXQ1Q9C009 403 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 MKRN2Q9H000 416 aaKnown RBP16.83■□□□□ 0.28
TMCO1-207ENST00000580248 RBM38Q9H0Z9 239 aaKnown RBP16.83■□□□□ 0.28
TMCO1-207ENST00000580248 TBC1D17Q9HA65 648 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 TPT1P8Q9HAU6 139 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 ACSL5Q9ULC5 683 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 WBP11Q9Y2W2 641 aaKnown RBP16.83■□□□□ 0.28
TMCO1-207ENST00000580248 ATG2BQ96BY7 2078 aa16.83■□□□□ 0.28
TMCO1-207ENST00000580248 C1orf226A1L170 272 aa16.82■□□□□ 0.28
TMCO1-207ENST00000580248 KCNJ13O60928 360 aa16.82■□□□□ 0.28
TMCO1-207ENST00000580248 B3GALT4O96024 378 aa16.82■□□□□ 0.28
TMCO1-207ENST00000580248 GNAO1P09471 354 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms