RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PWP1Q13610 501 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 USP10Q14694 798 aaKnown RBP16.84■□□□□ 0.29
MKS1-209ENST00000580127 AGTRAPQ6RW13 159 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 PRSS41Q7RTY9 318 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 GALNTL5Q7Z4T8 443 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.84■□□□□ 0.29
MKS1-209ENST00000580127 CAND1Q86VP6 1230 aaKnown RBP16.84■□□□□ 0.29
MKS1-209ENST00000580127 SLC26A11Q86WA9 606 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 CEP97Q8IW35 865 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 DENND6AQ8IWF6 608 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 CPNE9Q8IYJ1 553 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 GPATCH11Q8N954 259 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 MFSD9Q8NBP5 474 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 KCT2Q8NC54 265 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 CA5BP1Q8WTZ4 195 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 TBC1D20Q96BZ9 403 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 PEX11GQ96HA9 241 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 SPOCK3Q9BQ16 436 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 MACROD1Q9BQ69 325 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 FAM167BQ9BTA0 163 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 CDCP1Q9H5V8 836 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 TAS2R13Q9NYV9 303 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 FEZF1A0PJY2 475 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 URADA6NGE7 173 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 E9PLN8 166 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 FHP07954 510 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 RGS1Q08116 209 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 SP140Q13342 867 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 NAE1Q13564 534 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 ZNF549Q6P9A3 640 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 LCTLQ6UWM7 567 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 OTOGQ6ZRI0 2925 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 PIWIL4Q7Z3Z4 852 aaKnown RBP16.83■□□□□ 0.28
MKS1-209ENST00000580127 CYP4X1Q8N118 509 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 MYO1HQ8N1T3 1032 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 POGLUT1Q8NBL1 392 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 ARMC2Q8NEN0 867 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 TRIM58Q8NG06 486 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 GIMAP7Q8NHV1 300 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 CD200R1Q8TD46 325 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 PHF10Q8WUB8 498 aaKnown RBP16.83■□□□□ 0.28
MKS1-209ENST00000580127 OLFM1Q99784 485 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 VKORC1Q9BQB6 163 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 TRIM8Q9BZR9 551 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 ATG10Q9H0Y0 220 aa16.83■□□□□ 0.28
MKS1-209ENST00000580127 TSPAN10Q9H1Z9 355 aaPredicted RBP16.83■□□□□ 0.28
MKS1-209ENST00000580127 F8P00451 2351 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 OR2W5A6NFC9 320 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 KLRC4-KLRK1H3BQV0 150 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 FCHO1O14526 889 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 OR1F1O43749 312 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 PRMT3O60678 531 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 SLC25A12O75746 678 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 HAUS5O94927 633 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 ZNF24P17028 368 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 EFNA3P52797 238 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 SLC26A5P58743 744 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 RHAGQ02094 409 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 ABHD13Q7L211 337 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 AGAP11Q8TF27 550 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 EEF1AKMT1Q8WVE0 214 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 ATL1Q8WXF7 558 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 C14orf79Q96F83 325 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 FRMD6Q96NE9 622 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 PTCHD1Q96NR3 888 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 AARSD1Q9BTE6 412 aaKnown RBP16.82■□□□□ 0.28
MKS1-209ENST00000580127 LZTFL1Q9NQ48 299 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 PDE10AQ9Y233 779 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 C2CD3Q4AC94 2353 aa16.82■□□□□ 0.28
MKS1-209ENST00000580127 NCOA6Q14686 2063 aaPredicted RBP16.82■□□□□ 0.28
MKS1-209ENST00000580127 CACNA1CQ13936 2221 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 PDZD2O15018 2839 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 ZCWPW2A0A1B0GU75 182 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 PSMD12O00232 456 aaPredicted RBP16.81■□□□□ 0.28
MKS1-209ENST00000580127 FANCGO15287 622 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 LCMT2O60294 686 aaKnown RBP16.81■□□□□ 0.28
MKS1-209ENST00000580127 CDC123O75794 336 aaPredicted RBP16.81■□□□□ 0.28
MKS1-209ENST00000580127 SERPIND1P05546 499 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 CCDC175P0C221 793 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 CDH1P12830 882 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 NPPBP16860 134 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 ALOX12P18054 663 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 SLC1A2P43004 574 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 DUPD1Q68J44 220 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 TMEM211Q6ICI0 200 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 PDSS2Q86YH6 399 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 ZNF295-AS1Q8N0V1 137 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.81■□□□□ 0.28
MKS1-209ENST00000580127 ELP5Q8TE02 316 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 MAGOHBQ96A72 148 aaKnown RBP16.81■□□□□ 0.28
MKS1-209ENST00000580127 NAP1L3Q99457 506 aaPredicted RBP16.81■□□□□ 0.28
MKS1-209ENST00000580127 SGPP1Q9BX95 441 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 ARL15Q9NXU5 204 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 MED16Q9Y2X0 877 aa16.81■□□□□ 0.28
MKS1-209ENST00000580127 KLF13Q9Y2Y9 288 aaPredicted RBP16.81■□□□□ 0.28
MKS1-209ENST00000580127 CCDC168Q8NDH2 2452 aa16.8■□□□□ 0.28
MKS1-209ENST00000580127 TRBC2A0A5B9 178 aa16.8■□□□□ 0.28
MKS1-209ENST00000580127 GOLGA8MH3BSY2 632 aa16.8■□□□□ 0.28
MKS1-209ENST00000580127 NDUFS4O43181 175 aa16.8■□□□□ 0.28
MKS1-209ENST00000580127 CHST10O43529 356 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms