RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 LAMA5O15230 3695 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 NBEAQ8NFP9 2946 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 URB1O60287 2271 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 EPG5Q9HCE0 2579 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 NCKAP5O14513 1909 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 BSNQ9UPA5 3926 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 CCDC187A0A096LP49 1063 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 IQANK1A0A1B0GTG1 560 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC9B1P1A6NJY1 282 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 SMIM23A6NLE4 172 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 C2orf74A8MZ97 194 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ISM1B1AKI9 464 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 B4E171 279 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 E7EQ34 232 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 STX16-NPEPL1H3BU86 382 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TAF4O00268 1085 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 PPP6CO00743 305 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 UBFD1O14562 309 aaKnown RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 OR7A17O14581 309 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 STX16O14662 325 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 P2RX6O15547 441 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TLX3O43711 291 aaPredicted RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 LCMT2O60294 686 aaKnown RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 DLX3O60479 287 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 GLRA3O75311 464 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 KRT37O76014 449 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 FKBP9O95302 570 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 SIX3O95343 332 aaPredicted RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ZBTB11O95625 1053 aaPredicted RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 GUCA1CO95843 209 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 SYF2O95926 243 aaKnown RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ONECUT2O95948 504 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 RPN2P04844 631 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 CAPN1P07384 714 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 GSTA1P08263 222 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 EBLN1P0CF75 366 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 FGF5P12034 268 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 FOLR1P15328 257 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF28P17035 718 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 KRT4P19013 534 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 CYP2A7P20853 494 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 CRHR1P34998 444 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 RORAP35398 523 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TSPAN7P41732 249 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 CASP2P42575 452 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 GLRBP48167 497 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 HNMTP50135 292 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 EFNA3P52797 238 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 CSNK1G2P78368 415 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 REEP5Q00765 189 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 MC2RQ01718 297 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 PRDX1Q06830 199 aaKnown RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TRAF3Q13114 568 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 NAE1Q13564 534 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 KCNAB1Q14722 419 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 PCBP2Q15366 365 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TSNAXIP1Q2TAA8 658 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 PRTGQ2VWP7 1150 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 MAP9Q49MG5 647 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 UNC50Q53HI1 259 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TAF1BQ53T94 588 aaPredicted RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 CATSPEREQ5SY80 951 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ZBTB37Q5TC79 503 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 PRAMEF13Q5VWM6 474 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 FRMPD2BQ6IN97 320 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 FBXO42Q6P3S6 717 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 CRIP3Q6Q6R5 217 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 RPS27LQ71UM5 84 aaKnown RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ERMP1Q7Z2K6 904 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 DGLUCYQ7Z3D6 616 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TIPARPQ7Z3E1 657 aaKnown RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TBC1D1Q86TI0 1168 aaPredicted RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TAX1BP1Q86VP1 789 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 KMT5CQ86Y97 462 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 GPSM1Q86YR5 675 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 PLXDC1Q8IUK5 500 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 LSMEM2Q8N112 164 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 C4orf33Q8N1A6 199 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 GALNT15Q8N3T1 639 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 C19orf47Q8N9M1 422 aaKnown RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ANKRD53Q8N9V6 530 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC38A9Q8NBW4 561 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF740Q8NDX6 193 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 OR1L3Q8NH93 324 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 STAG3L4Q8TBR4 150 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF483Q8TF39 744 aaPredicted RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 SMPDL3AQ92484 453 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 NCSTNQ92542 709 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 NEIL2Q969S2 332 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ARL8AQ96BM9 186 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 PYCR2Q96C36 320 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 GRAMD1AQ96CP6 724 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TM4SF19Q96DZ7 209 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 L3HYPDHQ96EM0 354 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 APOPT1Q96IL0 206 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 CABS1Q96KC9 395 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 C10orf90Q96M02 699 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TMEM74Q96NL1 305 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 FCRL4Q96PJ5 515 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TMEM237Q96Q45 408 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms