RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 APOA4P06727 396 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 APRTP07741 180 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 ITGA3P26006 1051 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 MGAT1P26572 445 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 FMO4P31512 558 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 STIP1P31948 543 aaKnown RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 MC3RP41968 323 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 KCNJ1P48048 391 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 GLRBP48167 497 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 VSX2P58304 361 aaPredicted RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 FASTKQ14296 549 aaKnown RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 CYP2A13Q16696 494 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 CRB2Q5IJ48 1285 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 CTSL3PQ5NE16 218 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 SEL1L2Q5TEA6 688 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 PTRHD1Q6GMV3 140 aaKnown RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 FRMPD2BQ6IN97 320 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 TLDC1Q6P9B6 456 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 CNSTQ6PJW8 725 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 OVCH1Q7RTY7 1134 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 DCUN1D3Q8IWE4 304 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 PRSS58Q8IYP2 241 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 OR4N4Q8N0Y3 316 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 CLEC1AQ8NC01 280 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 PPHLN1Q8NEY8 458 aaKnown RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 OR2L8Q8NGY9 312 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 DENND1AQ8TEH3 1009 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 SKA2Q8WVK7 121 aaPredicted RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 ASZ1Q8WWH4 475 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 NINJ1Q92982 152 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 TSPAN17Q96FV3 270 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 TTC1Q99614 292 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 C17orf62Q9BQA9 187 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 CD244Q9BZW8 370 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 ILKAPQ9H0C8 392 aaPredicted RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 P2RY12Q9H244 342 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 SYNPO2LQ9H987 977 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 GCM1Q9NP62 436 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 CUTCQ9NTM9 273 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 C5AR2Q9P296 337 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 GALPQ9UBC7 116 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 ERRFI1Q9UJM3 462 aaPredicted RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 CDC23Q9UJX2 597 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 SLC39A10Q9ULF5 831 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 RIMKLBQ9ULI2 386 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 TTC7AQ9ULT0 858 aaPredicted RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 GUCA1BQ9UMX6 200 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 G3BP2Q9UN86 482 aaKnown RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 SRPK3Q9UPE1 567 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 B3GNT3Q9Y2A9 372 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 HS3ST3B1Q9Y662 390 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 NAV2Q8IVL1 2488 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 NBPF19A0A087WUL8 3843 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 USP9XQ93008 2570 aaPredicted RBP5.93□□□□□ -1.46
NUP88-212ENST00000576708 A0A0J9YVX5 310 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 A0A1B0GX78 115 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 A0A1W2PPV9 198 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 ERI2A8K979 691 aaKnown RBP5.93□□□□□ -1.46
NUP88-212ENST00000576708 AGPSO00116 658 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 HRKO00198 91 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 PRMT5O14744 637 aaPredicted RBP5.93□□□□□ -1.46
NUP88-212ENST00000576708 DSCR3O14972 297 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 NIPSNAP2O75323 286 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 NDUFS3O75489 264 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 C1orf105O95561 183 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 EIF2S1P05198 315 aaKnown RBP5.93□□□□□ -1.46
NUP88-212ENST00000576708 MMP11P24347 488 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 ARSFP54793 590 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 EIF3BP55884 814 aaKnown RBP5.93□□□□□ -1.46
NUP88-212ENST00000576708 BASP1P80723 227 aaKnown RBP5.93□□□□□ -1.46
NUP88-212ENST00000576708 PLOD1Q02809 727 aaPredicted RBP5.93□□□□□ -1.46
NUP88-212ENST00000576708 Q0VFX4 171 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 TRIP13Q15645 432 aaPredicted RBP5.93□□□□□ -1.46
NUP88-212ENST00000576708 EMC4Q5J8M3 183 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 PCID2Q5JVF3 399 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 WASHC2DQ5SRD0 308 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 KIRREL2Q6UWL6 708 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 IGFL3Q6UXB1 125 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 UNC5DQ6UXZ4 953 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 LINC00696Q6ZRV3 163 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 Q6ZS92 163 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 NLRP9Q7RTR0 991 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 HPS6Q86YV9 775 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 IQCKQ8N0W5 287 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 MPP5Q8N3R9 675 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 ZADH2Q8N4Q0 377 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 OTUD6BQ8N6M0 293 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 CCDC89Q8N998 374 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 CATSPER1Q8NEC5 780 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 C8orf44Q96CB5 159 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 MFSD3Q96ES6 412 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 IP6K3Q96PC2 410 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 SELENOSQ9BQE4 189 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 ACAT2Q9BWD1 397 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 TSSK1BQ9BXA7 367 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 SLC29A3Q9BZD2 475 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 TREX1Q9NSU2 369 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 SYBUQ9NX95 663 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 IL1RAPL1Q9NZN1 696 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms