RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 TRIM4Q9C037 500 aa10.12□□□□□ -0.79
LITAF-216ENST00000574848 ING2Q9H160 280 aa10.12□□□□□ -0.79
LITAF-216ENST00000574848 MYLK2Q9H1R3 596 aa10.12□□□□□ -0.79
LITAF-216ENST00000574848 SLC26A1Q9H2B4 701 aa10.12□□□□□ -0.79
LITAF-216ENST00000574848 IGSF5Q9NSI5 407 aa10.12□□□□□ -0.79
LITAF-216ENST00000574848 ANKMY1Q9P2S6 941 aa10.12□□□□□ -0.79
LITAF-216ENST00000574848 GALPQ9UBC7 116 aa10.12□□□□□ -0.79
LITAF-216ENST00000574848 DHCR7Q9UBM7 475 aaKnown RBP10.12□□□□□ -0.79
LITAF-216ENST00000574848 CIDEBQ9UHD4 219 aa10.12□□□□□ -0.79
LITAF-216ENST00000574848 TRMT6Q9UJA5 497 aaKnown RBP10.12□□□□□ -0.79
LITAF-216ENST00000574848 PRDM4Q9UKN5 801 aa10.12□□□□□ -0.79
LITAF-216ENST00000574848 TRIM33Q9UPN9 1127 aa10.12□□□□□ -0.79
LITAF-216ENST00000574848 KLHL20Q9Y2M5 609 aa10.12□□□□□ -0.79
LITAF-216ENST00000574848 PCDHGB7Q9Y5F8 929 aa10.12□□□□□ -0.79
LITAF-216ENST00000574848 GOLGA8QA0A0J9YX86 632 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 GOLGA8OA6NCC3 632 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 ARGFXA6NJG6 315 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 GOLGA8NF8WBI6 632 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 PYCARD-AS1I3L0S3 204 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 SRPX2O60687 465 aaPredicted RBP10.11□□□□□ -0.79
LITAF-216ENST00000574848 CTSVO60911 334 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 CNOT3O75175 753 aaKnown RBP10.11□□□□□ -0.79
LITAF-216ENST00000574848 IPO13O94829 963 aaKnown RBP10.11□□□□□ -0.79
LITAF-216ENST00000574848 CATP04040 527 aaKnown RBP10.11□□□□□ -0.79
LITAF-216ENST00000574848 F7P08709 466 aaPredicted RBP10.11□□□□□ -0.79
LITAF-216ENST00000574848 MPC1LP0DKB6 136 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 KITP10721 976 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 ZNF37AP17032 561 aaPredicted RBP10.11□□□□□ -0.79
LITAF-216ENST00000574848 TFEBP19484 476 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 CHRM3P20309 590 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 PSMB5P28074 263 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 SERPINB3P29508 390 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 HSD17B2P37059 387 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 RRADP55042 308 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 CDKN2DP55273 166 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 FOXK1P85037 733 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 KCNC4Q03721 635 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 GALNT1Q10472 559 aaPredicted RBP10.11□□□□□ -0.79
LITAF-216ENST00000574848 ZNF460Q14592 562 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 GRM7Q14831 915 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 KRT72Q14CN4 511 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 NKAIN1Q4KMZ8 207 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 FAM69BQ5VUD6 431 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 ASB18Q6ZVZ8 466 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 CLNKQ7Z7G1 428 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 MTDHQ86UE4 582 aaKnown RBP10.11□□□□□ -0.79
LITAF-216ENST00000574848 HPS6Q86YV9 775 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 C2orf73Q8N5S3 287 aaPredicted RBP10.11□□□□□ -0.79
LITAF-216ENST00000574848 OR9A1PQ8NGU1 263 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 CD200R1Q8TD46 325 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 SKA2Q8WVK7 121 aaPredicted RBP10.11□□□□□ -0.79
LITAF-216ENST00000574848 SMPDL3AQ92484 453 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 NACC2Q96BF6 587 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 KLHL29Q96CT2 875 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 GPR78Q96P69 363 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 SLC30A3Q99726 388 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 GATA5Q9BWX5 397 aaPredicted RBP10.11□□□□□ -0.79
LITAF-216ENST00000574848 RASSF4Q9H2L5 321 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 WDR54Q9H977 334 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 KCNK13Q9HB14 408 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 ACSS2Q9NR19 701 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 SLC22A11Q9NSA0 550 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 MARCOQ9UEW3 520 aaPredicted RBP10.11□□□□□ -0.79
LITAF-216ENST00000574848 HAO1Q9UJM8 370 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 DHRS7Q9Y394 339 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 MED13Q9UHV7 2174 aa10.11□□□□□ -0.79
LITAF-216ENST00000574848 TRPC5OSA6NMA1 111 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 ZNF839A8K0R7 811 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 ANKRD65E5RJM6 399 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 GFYI3L273 518 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 DSCR3O14972 297 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 ITM2AO43736 263 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 DLX3O60479 287 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 WISP3O95389 354 aaPredicted RBP10.1□□□□□ -0.79
LITAF-216ENST00000574848 ALBP02768 609 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 UMODP07911 640 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 SERPINA6P08185 405 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 CALB2P22676 271 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 FOLR3P41439 243 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 CD97P48960 835 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 RGS4P49798 205 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 RPL14P50914 215 aaKnown RBP10.1□□□□□ -0.79
LITAF-216ENST00000574848 MNAT1P51948 309 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 PGDP52209 483 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 NAGLUP54802 743 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 EMP3P54852 163 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 RELAQ04206 551 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 CHAF1BQ13112 559 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 ATP1A4Q13733 1029 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 FASTKQ14296 549 aaKnown RBP10.1□□□□□ -0.79
LITAF-216ENST00000574848 SSPNQ14714 243 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 ZRSR2Q15696 482 aaKnown RBP10.1□□□□□ -0.79
LITAF-216ENST00000574848 C1orf189Q5VU69 101 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 METTL21CQ5VZV1 264 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 ACAD11Q709F0 780 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 COX15Q7KZN9 410 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 HOMEZQ8IX15 550 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 C10orf67Q8IYJ2 551 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 ARHGAP24Q8N264 748 aa10.1□□□□□ -0.79
LITAF-216ENST00000574848 STAG3L4Q8TBR4 150 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms