RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 MLLT3P42568 568 aaPredicted RBP22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 SEPHS1P49903 392 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 DIO3P55073 304 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 TBL3Q12788 808 aaKnown RBP22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 KIAA0040Q15053 153 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 KHDRBS2Q5VWX1 349 aaKnown RBP22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 ZNF574Q6ZN55 896 aaPredicted RBP22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 SPATA19Q7Z5L4 167 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 ASPGQ86U10 573 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 SLC13A3Q8WWT9 602 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 ERP27Q96DN0 273 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 POLR3HQ9Y535 204 aaPredicted RBP22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 COPG1Q9Y678 874 aaKnown RBP22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 ASCC3Q8N3C0 2202 aaKnown RBP22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 MDC1Q14676 2089 aaKnown RBP22.95■■□□□ 1.26
ATPAF1-213ENST00000574428 NPIPB8E9PQR5 432 aa22.95■■□□□ 1.26
ATPAF1-213ENST00000574428 H0YGG7 62 aa22.95■■□□□ 1.26
ATPAF1-213ENST00000574428 ZBTB11O95625 1053 aaPredicted RBP22.95■■□□□ 1.26
ATPAF1-213ENST00000574428 ARF3P61204 181 aaPredicted RBP22.95■■□□□ 1.26
ATPAF1-213ENST00000574428 EMX2Q04743 252 aa22.95■■□□□ 1.26
ATPAF1-213ENST00000574428 ACTN3Q08043 901 aaPredicted RBP22.95■■□□□ 1.26
ATPAF1-213ENST00000574428 TMEM71Q6P5X7 295 aa22.95■■□□□ 1.26
ATPAF1-213ENST00000574428 C1orf52Q8N6N3 182 aaKnown RBP22.95■■□□□ 1.26
ATPAF1-213ENST00000574428 AICDAQ9GZX7 198 aa22.95■■□□□ 1.26
ATPAF1-213ENST00000574428 ZNF385DQ9H6B1 395 aa22.95■■□□□ 1.26
ATPAF1-213ENST00000574428 NMRK1Q9NWW6 199 aa22.95■■□□□ 1.26
ATPAF1-213ENST00000574428 P2RX6O15547 441 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 CBFA2T3O75081 653 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 HYAL2Q12891 473 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 CUL3Q13618 768 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 DEPDC1Q5TB30 811 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 DGLUCYQ7Z3D6 616 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 PRSS42Q7Z5A4 293 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 CLNKQ7Z7G1 428 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 CARFQ8N187 725 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 DNAJC22Q8N4W6 341 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 RERGQ96A58 199 aaPredicted RBP22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 THAP11Q96EK4 314 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 KLHL31Q9H511 634 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 LRIT2A6NDA9 550 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 PROB1E7EW31 1015 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 EIF2S1P05198 315 aaKnown RBP22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 ACSM2AQ08AH3 577 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 KCNAB1Q14722 419 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 IL23RQ5VWK5 629 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 ACSM2BQ68CK6 577 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 CHTF18Q8WVB6 975 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 GFM1Q96RP9 751 aaKnown RBP22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 SORBS1Q9BX66 1292 aaKnown RBP22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 EBPLQ9BY08 206 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 PDE7BQ9NP56 450 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 AIG1Q9NVV5 245 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 NOP53Q9NZM5 478 aaKnown RBP22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 DLGAP4Q9Y2H0 992 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 HCN4Q9Y3Q4 1203 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 UNC13CQ8NB66 2214 aa22.94■■□□□ 1.26
ATPAF1-213ENST00000574428 CTSBP07858 339 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 ACADVLP49748 655 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 NME5P56597 212 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 VSX2P58304 361 aaPredicted RBP22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 BNIP1Q12981 228 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 SMU1Q2TAY7 513 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 SPIN4Q56A73 249 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 ZC3H12BQ5HYM0 836 aaKnown RBP22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 TOR1AIP1Q5JTV8 583 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 STPG1Q5TH74 334 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 MCATQ8IVS2 390 aaKnown RBP22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 KCT2Q8NC54 265 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 OR4D9Q8NGE8 314 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 WDR48Q8TAF3 677 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 TM4SF19Q96DZ7 209 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 SLC45A3Q96JT2 553 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 REXO4Q9GZR2 422 aaKnown RBP22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 SEMA5BQ9P283 1151 aa22.93■■□□□ 1.26
ATPAF1-213ENST00000574428 RTCAO00442 366 aaKnown RBP22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 PLPP1O14494 284 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 GP1BAP07359 652 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 SLC35G6P0C7Q6 338 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 IDO1P14902 403 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 ARL4DP49703 201 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 RAP1GDS1P52306 607 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 HSD11B2P80365 405 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 MAD2L1Q13257 205 aaPredicted RBP22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 COL9A2Q14055 689 aaPredicted RBP22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 HKDC1Q2TB90 917 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 NOXRED1Q6NXP6 359 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 COMMD6Q7Z4G1 85 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 NT5CQ8TCD5 201 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 C11orf24Q96F05 449 aaPredicted RBP22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 SLC6A16Q9GZN6 736 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 EIF3LQ9Y262 564 aaKnown RBP22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 TMED5Q9Y3A6 229 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 GPR45Q9Y5Y3 372 aa22.92■■□□□ 1.26
ATPAF1-213ENST00000574428 IGHV5-10-1A0A0J9YXX1 117 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 C4orf51C9J302 202 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 MAP3K7O43318 606 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 G6PDP11413 515 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 PLA2G16P53816 162 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 RAE1P78406 368 aaKnown RBP22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 RGS1Q08116 209 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms