RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ST3GAL4Q11206 333 aa15.06■□□□□ 0
NUP88-207ENST00000573584 FBXO43Q4G163 708 aa15.06■□□□□ 0
NUP88-207ENST00000573584 RGMBQ6NW40 437 aa15.06■□□□□ 0
NUP88-207ENST00000573584 Q6ZNB5 142 aa15.06■□□□□ 0
NUP88-207ENST00000573584 C1orf52Q8N6N3 182 aaKnown RBP15.06■□□□□ 0
NUP88-207ENST00000573584 COL21A1Q96P44 957 aa15.06■□□□□ 0
NUP88-207ENST00000573584 CHCHD6Q9BRQ6 235 aa15.06■□□□□ 0
NUP88-207ENST00000573584 CENPOQ9BU64 300 aa15.06■□□□□ 0
NUP88-207ENST00000573584 SUV39H2Q9H5I1 410 aa15.06■□□□□ 0
NUP88-207ENST00000573584 QPCTLQ9NXS2 382 aa15.06■□□□□ 0
NUP88-207ENST00000573584 PCDHGA2Q9Y5H1 932 aa15.06■□□□□ 0
NUP88-207ENST00000573584 ABLIM3O94929 683 aa15.06■□□□□ 0
NUP88-207ENST00000573584 ETHE1O95571 254 aa15.06■□□□□ 0
NUP88-207ENST00000573584 PTTG1O95997 202 aa15.06■□□□□ 0
NUP88-207ENST00000573584 PTHP01270 115 aa15.06■□□□□ 0
NUP88-207ENST00000573584 ANXA8P13928 327 aa15.06■□□□□ 0
NUP88-207ENST00000573584 SPNP16150 400 aa15.06■□□□□ 0
NUP88-207ENST00000573584 RGS6P49758 472 aa15.06■□□□□ 0
NUP88-207ENST00000573584 CDH12P55289 794 aa15.06■□□□□ 0
NUP88-207ENST00000573584 SNRPD1P62314 119 aaKnown RBP15.06■□□□□ 0
NUP88-207ENST00000573584 PRKCDQ05655 676 aa15.06■□□□□ 0
NUP88-207ENST00000573584 ZNF362Q5T0B9 420 aaPredicted RBP15.06■□□□□ 0
NUP88-207ENST00000573584 ELMO1Q92556 727 aa15.06■□□□□ 0
NUP88-207ENST00000573584 C11orf24Q96F05 449 aaPredicted RBP15.06■□□□□ 0
NUP88-207ENST00000573584 NIPSNAP1Q9BPW8 284 aa15.06■□□□□ 0
NUP88-207ENST00000573584 VN1R3Q9BXE9 311 aa15.06■□□□□ 0
NUP88-207ENST00000573584 ZNF226Q9NYT6 803 aa15.06■□□□□ 0
NUP88-207ENST00000573584 MGAT4DA6NG13 374 aa15.06■□□□□ 0
NUP88-207ENST00000573584 HLA-EP13747 358 aa15.06■□□□□ 0
NUP88-207ENST00000573584 CTSOP43234 321 aaPredicted RBP15.06■□□□□ 0
NUP88-207ENST00000573584 ASMTP46597 345 aa15.06■□□□□ 0
NUP88-207ENST00000573584 CRISP3P54108 245 aa15.06■□□□□ 0
NUP88-207ENST00000573584 RAE1P78406 368 aaKnown RBP15.06■□□□□ 0
NUP88-207ENST00000573584 SPIBQ01892 262 aa15.06■□□□□ 0
NUP88-207ENST00000573584 ANXA8L1Q5VT79 327 aa15.06■□□□□ 0
NUP88-207ENST00000573584 ADNP2Q6IQ32 1131 aa15.06■□□□□ 0
NUP88-207ENST00000573584 HS6ST3Q8IZP7 471 aa15.06■□□□□ 0
NUP88-207ENST00000573584 OR4A15Q8NGL6 344 aa15.06■□□□□ 0
NUP88-207ENST00000573584 VOPP1Q96AW1 172 aa15.06■□□□□ 0
NUP88-207ENST00000573584 MED8Q96G25 268 aa15.06■□□□□ 0
NUP88-207ENST00000573584 SGK2Q9HBY8 427 aa15.06■□□□□ 0
NUP88-207ENST00000573584 POFUT2Q9Y2G5 429 aa15.06■□□□□ 0
NUP88-207ENST00000573584 HOXA2O43364 376 aa15.05■□□□□ 0
NUP88-207ENST00000573584 ASNA1O43681 348 aa15.05■□□□□ 0
NUP88-207ENST00000573584 AOC2O75106 756 aa15.05■□□□□ 0
NUP88-207ENST00000573584 MED26O95402 600 aa15.05■□□□□ 0
NUP88-207ENST00000573584 IDSP22304 550 aa15.05■□□□□ 0
NUP88-207ENST00000573584 SPINT3P49223 89 aa15.05■□□□□ 0
NUP88-207ENST00000573584 C10orf62Q5T681 223 aaPredicted RBP15.05■□□□□ 0
NUP88-207ENST00000573584 DESI1Q6ICB0 168 aa15.05■□□□□ 0
NUP88-207ENST00000573584 METTL3Q86U44 580 aaKnown RBP15.05■□□□□ 0
NUP88-207ENST00000573584 LGI4Q8N135 537 aa15.05■□□□□ 0
NUP88-207ENST00000573584 DEPDC4Q8N2C3 294 aa15.05■□□□□ 0
NUP88-207ENST00000573584 METTL4Q8N3J2 472 aa15.05■□□□□ 0
NUP88-207ENST00000573584 DENND6BQ8NEG7 585 aa15.05■□□□□ 0
NUP88-207ENST00000573584 GPR156Q8NFN8 814 aa15.05■□□□□ 0
NUP88-207ENST00000573584 CLP1Q92989 425 aaKnown RBP15.05■□□□□ 0
NUP88-207ENST00000573584 Q96MT0 163 aa15.05■□□□□ 0
NUP88-207ENST00000573584 RAD9AQ99638 391 aa15.05■□□□□ 0
NUP88-207ENST00000573584 CTRCQ99895 268 aa15.05■□□□□ 0
NUP88-207ENST00000573584 BRD9Q9H8M2 597 aa15.05■□□□□ 0
NUP88-207ENST00000573584 IMPAD1Q9NX62 359 aa15.05■□□□□ 0
NUP88-207ENST00000573584 CCDC59Q9P031 241 aaKnown RBP15.05■□□□□ 0
NUP88-207ENST00000573584 CAB39Q9Y376 341 aaPredicted RBP15.05■□□□□ 0
NUP88-207ENST00000573584 PCDHGA3Q9Y5H0 932 aa15.05■□□□□ 0
NUP88-207ENST00000573584 AP1M2Q9Y6Q5 423 aa15.05■□□□□ 0
NUP88-207ENST00000573584 ZNF106Q9H2Y7 1883 aaKnown RBP15.05■□□□□ -0
NUP88-207ENST00000573584 GNG14A0A1W2PPG7 69 aa15.05■□□□□ -0
NUP88-207ENST00000573584 PRRG1O14668 218 aa15.05■□□□□ -0
NUP88-207ENST00000573584 DNTTP04053 509 aa15.05■□□□□ -0
NUP88-207ENST00000573584 EIF2S1P05198 315 aaKnown RBP15.05■□□□□ -0
NUP88-207ENST00000573584 C1SP09871 688 aa15.05■□□□□ -0
NUP88-207ENST00000573584 NAE1Q13564 534 aa15.05■□□□□ -0
NUP88-207ENST00000573584 GPR162Q16538 588 aa15.05■□□□□ -0
NUP88-207ENST00000573584 MICAQ29983 383 aa15.05■□□□□ -0
NUP88-207ENST00000573584 EXOC3L2Q2M3D2 409 aa15.05■□□□□ -0
NUP88-207ENST00000573584 SLC7A5P1Q8MH63 180 aa15.05■□□□□ -0
NUP88-207ENST00000573584 ECHDC3Q96DC8 303 aa15.05■□□□□ -0
NUP88-207ENST00000573584 STARD7Q9NQZ5 370 aa15.05■□□□□ -0
NUP88-207ENST00000573584 ZNF232Q9UNY5 417 aa15.05■□□□□ -0
NUP88-207ENST00000573584 TTC36A6NLP5 189 aa15.04■□□□□ -0
NUP88-207ENST00000573584 HAT1O14929 419 aa15.04■□□□□ -0
NUP88-207ENST00000573584 KPNA5O15131 536 aa15.04■□□□□ -0
NUP88-207ENST00000573584 SRCP12931 536 aa15.04■□□□□ -0
NUP88-207ENST00000573584 ETFAP13804 333 aa15.04■□□□□ -0
NUP88-207ENST00000573584 GABRB1P18505 474 aa15.04■□□□□ -0
NUP88-207ENST00000573584 OLR1P78380 273 aa15.04■□□□□ -0
NUP88-207ENST00000573584 KCNC3Q14003 757 aa15.04■□□□□ -0
NUP88-207ENST00000573584 IFI44LQ53G44 452 aa15.04■□□□□ -0
NUP88-207ENST00000573584 COX20Q5RI15 118 aa15.04■□□□□ -0
NUP88-207ENST00000573584 OR4C15Q8NGM1 316 aa15.04■□□□□ -0
NUP88-207ENST00000573584 ASZ1Q8WWH4 475 aa15.04■□□□□ -0
NUP88-207ENST00000573584 MCCC1Q96RQ3 725 aaPredicted RBP15.04■□□□□ -0
NUP88-207ENST00000573584 CCM2Q9BSQ5 444 aa15.04■□□□□ -0
NUP88-207ENST00000573584 ITM2CQ9NQX7 267 aa15.04■□□□□ -0
NUP88-207ENST00000573584 MS4A12Q9NXJ0 267 aa15.04■□□□□ -0
NUP88-207ENST00000573584 ZNF282Q9UDV7 671 aaPredicted RBP15.04■□□□□ -0
NUP88-207ENST00000573584 IFT52Q9Y366 437 aa15.04■□□□□ -0
NUP88-207ENST00000573584 PPIL1Q9Y3C6 166 aa15.04■□□□□ -0
NUP88-207ENST00000573584 PEX16Q9Y5Y5 336 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms