RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 RBBP5Q15291 538 aaKnown RBP12.89□□□□□ -0.35
RPAIN-213ENST00000573577 UGT8Q16880 541 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 DEFB109BQ30KR1 87 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 C1orf189Q5VU69 101 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 TMIGD1Q6UXZ0 262 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 TTLL10Q6ZVT0 673 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 EXD3Q8N9H8 876 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 PPP4R1Q8TF05 950 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 ATP6V1E2Q96A05 226 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 WDR34Q96EX3 536 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 MVB12AQ96EY5 273 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 NT5DC2Q9H857 520 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 GEMIN8Q9NWZ8 242 aaKnown RBP12.89□□□□□ -0.35
RPAIN-213ENST00000573577 NDOR1Q9UHB4 597 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 CDC14AQ9UNH5 594 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 RUVBL1Q9Y265 456 aaKnown RBP12.89□□□□□ -0.35
RPAIN-213ENST00000573577 ASB1Q9Y576 335 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 SPTBP11277 2137 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 CDC14CA4D256 554 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 URADA6NGE7 173 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 ANKDD1BA6NHY2 528 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 PRPF4O43172 522 aaKnown RBP eCLIP12.88□□□□□ -0.35
RPAIN-213ENST00000573577 NDUFS4O43181 175 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 LCMT2O60294 686 aaKnown RBP12.88□□□□□ -0.35
RPAIN-213ENST00000573577 DLX3O60479 287 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 PLIN3O60664 434 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 PROCP04070 461 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 RPS17P08708 135 aaKnown RBP12.88□□□□□ -0.35
RPAIN-213ENST00000573577 ARL1P40616 181 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-213ENST00000573577 HNF4AP41235 474 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 CCR10P46092 362 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 CCNG1P51959 295 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 POLE2P56282 527 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 HERVK_113P63132 956 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 SKP1P63208 163 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 IL10RAQ13651 578 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 COL9A2Q14055 689 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-213ENST00000573577 FAM53BQ14153 422 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 DOC2AQ14183 400 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 CASP8Q14790 479 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 HKDC1Q2TB90 917 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 LIPJQ5W064 366 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 PRMT9Q6P2P2 845 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 ZYG11AQ6WRX3 759 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 GOLGA7Q7Z5G4 137 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 VN1R4Q7Z5H5 301 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 BANPQ8N9N5 519 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 APOBEC4Q8WW27 367 aaKnown RBP12.88□□□□□ -0.35
RPAIN-213ENST00000573577 TM4SF19Q96DZ7 209 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 PGM2Q96G03 612 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 PKNOX2Q96KN3 472 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 MAGEB10Q96LZ2 347 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-213ENST00000573577 C1QTNF3Q9BXJ4 246 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 ERVK-6Q9BXR3 956 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 SEMA4CQ9C0C4 833 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 DRC3Q9H069 523 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 SPNS1Q9H2V7 528 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 IPPKQ9H8X2 491 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 ACTR8Q9H981 624 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 PRM3Q9NNZ6 103 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 COPG2Q9UBF2 871 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 GPN3Q9UHW5 284 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-213ENST00000573577 PCTPQ9UKL6 214 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 TCFL5Q9UL49 500 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 POLHQ9Y253 713 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 PLLPQ9Y342 182 aa12.88□□□□□ -0.35
RPAIN-213ENST00000573577 ATRXP46100 2492 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 LRRC14BA6NHZ5 514 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 C1QL1O75973 258 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 WFS1O76024 890 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 SUPT7LO94864 414 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 OTCP00480 354 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 SERPIND1P05546 499 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 EPORP19235 508 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 IMPDH1P20839 514 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 SERPINB1P30740 379 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 PRKAA2P54646 552 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 E2F2Q14209 437 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 NKAIN1Q4KMZ8 207 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 GRHL2Q6ISB3 625 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 NIPAL1Q6NVV3 410 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 MED27Q6P2C8 311 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 MYLK4Q86YV6 388 aaPredicted RBP12.87□□□□□ -0.35
RPAIN-213ENST00000573577 ZNF740Q8NDX6 193 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 REPS1Q96D71 796 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 C10orf90Q96M02 699 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 ADNPQ9H2P0 1102 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 NOL11Q9H8H0 719 aaKnown RBP12.87□□□□□ -0.35
RPAIN-213ENST00000573577 IFT80Q9P2H3 777 aaPredicted RBP12.87□□□□□ -0.35
RPAIN-213ENST00000573577 ADGRE2Q9UHX3 823 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 EMCNQ9ULC0 261 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 STK38LQ9Y2H1 464 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 PADI2Q9Y2J8 665 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 ACTL7BQ9Y614 415 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 KCNMB2Q9Y691 235 aa12.87□□□□□ -0.35
RPAIN-213ENST00000573577 SEC16AO15027 2179 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 PIEZO2Q9H5I5 2752 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 P2RX6O15547 441 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 CLEC3AO75596 197 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 CLDN9O95484 217 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms