RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 EGFLAMQ63HQ2 1017 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 FAHD1Q6P587 224 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 FAM43BQ6ZT52 329 aaPredicted RBP10.8□□□□□ -0.68
RPAIN-212ENST00000573126 CCDC149Q6ZUS6 474 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 TSEN54Q7Z6J9 526 aaKnown RBP10.8□□□□□ -0.68
RPAIN-212ENST00000573126 FAM124AQ86V42 546 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 ENTHD1Q8IYW4 607 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 ZNF480Q8WV37 535 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 APH1BQ8WW43 257 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 PPP1R14BQ96C90 147 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 CFHR5Q9BXR6 569 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 BRF2Q9HAW0 419 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 TDP1Q9NUW8 608 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 SELENONQ9NZV5 590 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 TBX21Q9UL17 535 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.8□□□□□ -0.68
RPAIN-212ENST00000573126 KCNE2Q9Y6J6 123 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 HSPE1-MOB4S4R3N1 261 aa10.8□□□□□ -0.68
RPAIN-212ENST00000573126 SLC5A10A0PJK1 596 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 SLC22A1O15245 554 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 FKTNO75072 461 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 TGFB1P01137 390 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 PCSK2P16519 638 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 TIA1P31483 386 aaKnown RBP eCLIP10.79□□□□□ -0.68
RPAIN-212ENST00000573126 HPCAL1P37235 193 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 PRLHRP49683 370 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 CXCR4P61073 352 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 TBPL1P62380 186 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 STARD3Q14849 445 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 SYT16Q17RD7 645 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 SYT6Q5T7P8 510 aaPredicted RBP10.79□□□□□ -0.68
RPAIN-212ENST00000573126 IER5LQ5T953 404 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 FAM180BQ6P0A1 224 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 C11orf65Q8NCR3 313 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 OR5AK3PQ8NH89 298 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 CHTF18Q8WVB6 975 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 STARD8Q92502 1023 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 DNASE1L2Q92874 299 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 CIDECQ96AQ7 238 aaPredicted RBP10.79□□□□□ -0.68
RPAIN-212ENST00000573126 YIPF6Q96EC8 236 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 FOPNLQ96NB1 174 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 FEVQ99581 238 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 PNMA8BQ9ULN7 279 aaPredicted RBP10.79□□□□□ -0.68
RPAIN-212ENST00000573126 PCDHGA6Q9Y5G7 932 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 CXorf51AA0A1B0GTR3 108 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 H3BM21 787 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 C6orf47O95873 294 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 ADH1AP07327 375 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 C21orf33P30042 268 aaPredicted RBP10.79□□□□□ -0.68
RPAIN-212ENST00000573126 PPM1AP35813 382 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 C21orf58P58505 322 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 SPIN4Q56A73 249 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 PAGE2BQ5JRK9 111 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 SLCO4C1Q6ZQN7 724 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 ARMCX6Q7L4S7 300 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 OR56A3Q8NH54 315 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 PROX1Q92786 737 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 TIFAQ96CG3 184 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 MRGPRX3Q96LB0 322 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 ZNF300Q96RE9 604 aaPredicted RBP10.79□□□□□ -0.68
RPAIN-212ENST00000573126 CCM2Q9BSQ5 444 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 DOHHQ9BU89 302 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 OR51B5Q9H339 312 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 HMG20AQ9NP66 347 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 RLIMQ9NVW2 624 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 NDUFAF4Q9P032 175 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 IL36AQ9UHA7 158 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 BTNL2Q9UIR0 455 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 OGDHLQ9ULD0 1010 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 MAFFQ9ULX9 164 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 PMF1-BGLAPU3KQ54 211 aa10.79□□□□□ -0.68
RPAIN-212ENST00000573126 ABHD14A-ACY1A0A1B0GW23 586 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 HIDE1A8MVS5 230 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 KPNA3O00505 521 aaPredicted RBP10.78□□□□□ -0.68
RPAIN-212ENST00000573126 HLA-EP13747 358 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 HSD3B1P14060 373 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 SYN1P17600 705 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 HSD3B2P26439 372 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 NNMTP40261 264 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 IDH2P48735 452 aaKnown RBP10.78□□□□□ -0.68
RPAIN-212ENST00000573126 MVDP53602 400 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 MVKQ03426 396 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 ZNF33BQ06732 778 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 ANXA8L1Q5VT79 327 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 MED27Q6P2C8 311 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 LIPIQ6XZB0 460 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 COMMD6Q7Z4G1 85 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 TECPR1Q7Z6L1 1165 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 ADCK1Q86TW2 530 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 TRAPPC5Q8IUR0 188 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 P3H2Q8IVL5 708 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 CFAP206Q8IYR0 622 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 KLHL23Q8NBE8 558 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 COQ8BQ96D53 544 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 TRIM39Q9HCM9 518 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 AKIP1Q9NQ31 210 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 NECTIN3Q9NQS3 549 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 TRNAU1APQ9NX07 287 aaKnown RBP10.78□□□□□ -0.68
RPAIN-212ENST00000573126 DAPK2Q9UIK4 370 aa10.78□□□□□ -0.68
RPAIN-212ENST00000573126 PCDHGB3Q9Y5G1 929 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms