RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 PPM1MQ96MI6 270 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 RILPQ96NA2 401 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZNF317Q96PQ6 595 aaPredicted RBP6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 TRAPPC9Q96Q05 1148 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 DEPDC7Q96QD5 511 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 MTERF1Q99551 399 aaKnown RBP6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 SERPINI1Q99574 410 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 TMEM120AQ9BXJ8 343 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 SLC7A5P2Q9GIP4 190 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 C20orf27Q9GZN8 174 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 SPNS1Q9H2V7 528 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZNF768Q9H5H4 540 aaKnown RBP6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 NT5DC2Q9H857 520 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 BRF2Q9HAW0 419 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 DMRT3Q9NQL9 472 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 PNPOQ9NVS9 261 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 TMEM9Q9P0T7 183 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 KLHL14Q9P2G3 628 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZFP69BQ9UJL9 534 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 TRIM33Q9UPN9 1127 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 PLCL2Q9UPR0 1127 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 KLK4Q9Y5K2 254 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 DNAJC15Q9Y5T4 150 aa6.3□□□□□ -1.4
CTDNEP1-204ENST00000570484 CEP192Q8TEP8 1941 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 IGHV5-51A0A0C4DH38 117 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 GOLGA8QA0A0J9YX86 632 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 IGHV5-10-1A0A0J9YXX1 117 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 A0A1B0GTL3 188 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 A0A1W2PQM1 296 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ARHGAP10A1A4S6 786 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 GOLGA8OA6NCC3 632 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 TMEM150CB9EJG8 249 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 GOLGA8NF8WBI6 632 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 FOXE1O00358 373 aaPredicted RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZSCAN9O15535 394 aaPredicted RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ERI3O43414 337 aaKnown RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 NRP2O60462 931 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 CLEC3AO75596 197 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 RSL1D1O76021 490 aaKnown RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 SEMA3DO95025 777 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 FAM107AO95990 144 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 PDYNP01213 254 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 THBS1P07996 1170 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 FTH1P19P0C7X4 201 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 NELFEP18615 380 aaKnown RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 CSRP1P21291 193 aaKnown RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 SDHBP21912 280 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 TGM1P22735 817 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 SERPINB3P29508 390 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 SSR2P43308 183 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 LSSP48449 732 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 NEK2P51955 445 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 VSX2P58304 361 aaPredicted RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 RPS13P62277 151 aaKnown RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 YBX1P67809 324 aaKnown RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 SIM1P81133 766 aaPredicted RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 CBX1P83916 185 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 RELAQ04206 551 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 FOXM1Q08050 763 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ACSM2AQ08AH3 577 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 SF3A3Q12874 501 aaKnown RBP eCLIP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 SQSTM1Q13501 440 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 PWP1Q13610 501 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 UBAP2LQ14157 1087 aaKnown RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 E2F2Q14209 437 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ABRAXAS2Q15018 415 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 NDUFA9Q16795 377 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 GALNTL6Q49A17 601 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 SPIN4Q56A73 249 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 TOR1AIP1Q5JTV8 583 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 TCTE1Q5JU00 501 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 KHDRBS2Q5VWX1 349 aaKnown RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ACSM2BQ68CK6 577 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 FCRL6Q6DN72 434 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 SCIMPQ6UWF3 145 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 RNF165Q6ZSG1 346 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 PAGE2Q7Z2X7 111 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 GLRX5Q86SX6 157 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 PIP4P1Q86T03 277 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 NUDT13Q86X67 352 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ANKRD53Q8N9V6 530 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 FNDC5Q8NAU1 212 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 AGBL5Q8NDL9 886 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZNF740Q8NDX6 193 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 SRFBP1Q8NEF9 429 aaKnown RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 OR4K1Q8NGD4 311 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 HUS1BQ8NHY5 278 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 CDC26Q8NHZ8 85 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZCCHC10Q8TBK6 192 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 BCAS4Q8TDM0 211 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 SLC13A3Q8WWT9 602 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 USP7Q93009 1102 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 GAL3ST3Q96A11 431 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 CMKLR1Q99788 373 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ELAC2Q9BQ52 826 aaKnown RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ACPTQ9BZG2 426 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ROGDIQ9GZN7 287 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 MEAF6Q9HAF1 191 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 LRTM1Q9HBL6 345 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 TNFRSF12AQ9NP84 129 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms