RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 NAALAD2Q9Y3Q0 740 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 OTOGQ6ZRI0 2925 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 PKDREJQ9NTG1 2253 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 DYTNA2CJ06 578 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 CDC7O00311 574 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 NDC80O14777 642 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 PIAS1O75925 651 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 WFS1O76024 890 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 TTC4O95801 387 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 RGS4P49798 205 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 ZNF33BQ06732 778 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 HYAL2Q12891 473 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 MFSD4BQ5TF39 518 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 PLAG1Q6DJT9 500 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 LRRC8EQ6NSJ5 796 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 CRLF3Q8IUI8 442 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 BEST3Q8N1M1 668 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 GPATCH11Q8N954 259 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 CAMKVQ8NCB2 501 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 GABPB2Q8TAK5 448 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 NEIL2Q969S2 332 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 FBXL8Q96CD0 374 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 SNF8Q96H20 258 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 PEX11GQ96HA9 241 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 C16orf45Q96MC5 204 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 TSNARE1Q96NA8 513 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 SIGLEC12Q96PQ1 595 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 NAT9Q9BTE0 207 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 PCBD2Q9H0N5 130 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 SLC22A7Q9Y694 548 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 CACNA1CQ13936 2221 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 ADGRG4Q8IZF6 3080 aa13.04□□□□□ -0.32
GTF3C1-211ENST00000569653 OR5H15A6NDH6 313 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 TTI1O43156 1089 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 GALR3O60755 368 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 IL2P60568 153 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 MRPS25P82663 173 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 ZRSR2Q15696 482 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 BTBD16Q32M84 506 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 C18orf21Q32NC0 220 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 DUPD1Q68J44 220 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 FJX1Q86VR8 437 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 ANKMY2Q8IV38 441 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 PDIK1LQ8N165 341 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 ANKRD53Q8N9V6 530 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 MDS2Q8NDY4 140 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 ANKRD49Q8WVL7 239 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 KRT12Q99456 494 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 MCMBPQ9BTE3 642 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 ANKHQ9HCJ1 492 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 SMYD2Q9NRG4 433 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 ANKRD10Q9NXR5 420 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 ARL15Q9NXU5 204 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 STMN3Q9NZ72 180 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 VWA7Q9Y334 891 aa13.03□□□□□ -0.32
GTF3C1-211ENST00000569653 TRBC2A0A5B9 178 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 NPEPPSL1A6NEC2 478 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 A8MUI8 341 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 NDUFS4O43181 175 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 OR1F1O43749 312 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 PRAMEF2O60811 474 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 SEC31AO94979 1220 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 GUCA1CO95843 209 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 ZNF888P0CJ79 500 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 PRF1P14222 555 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 ZNF37AP17032 561 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 CCND1P24385 295 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 SCTRP47872 440 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 CCR8P51685 355 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 ITGA8P53708 1063 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 TAS2R39P59534 338 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 REEP5Q00765 189 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 TUBA3CQ13748 450 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 ABRAXAS2Q15018 415 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 INAQ16352 499 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 DEFB134Q4QY38 66 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 SFT2D3Q587I9 215 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 ACER2Q5QJU3 275 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 ZNF468Q5VIY5 522 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 TUBA3EQ6PEY2 450 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 PAPD4Q6PIY7 484 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 ZC3HC1Q86WB0 502 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 CEP97Q8IW35 865 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 KIF2BQ8N4N8 673 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 PLPP5Q8NEB5 264 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 SPATA4Q8NEY3 305 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 UTP15Q8TED0 518 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 METTL21AQ8WXB1 218 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 RELTQ969Z4 430 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 HAUS8Q9BT25 410 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 KLHL31Q9H511 634 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 ABI3Q9P2A4 366 aa13.02□□□□□ -0.33
GTF3C1-211ENST00000569653 TEP1Q99973 2627 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 CSMD2Q7Z408 3487 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 EFCAB8A8MWE9 144 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 ZNHIT1O43257 154 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 CHST10O43529 356 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 UNC5CO95185 931 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms