RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 TMEM253P0C7T8 217 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 EPXP11678 715 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 PKMP14618 531 aaKnown RBP10.96□□□□□ -0.65
CLK3-222ENST00000568232 COMTP21964 271 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 PSMA3P25788 255 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 PLGLB1Q02325 96 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 PRDX1Q06830 199 aaKnown RBP10.96□□□□□ -0.65
CLK3-222ENST00000568232 STX1AQ16623 288 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 ICE2Q659A1 982 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 VN1R4Q7Z5H5 301 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 PDSS2Q86YH6 399 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 P3H2Q8IVL5 708 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 CYP4X1Q8N118 509 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 PPFIBP2Q8ND30 876 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 OR13J1Q8NGT2 312 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 GSDMBQ8TAX9 411 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 MCOLN3Q8TDD5 553 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 CREB3L4Q8TEY5 395 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 SARGQ9BW04 601 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 TSSK1BQ9BXA7 367 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 ZDHHC11Q9H8X9 412 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 KCMF1Q9P0J7 381 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 SPATA7Q9P0W8 599 aa10.96□□□□□ -0.65
CLK3-222ENST00000568232 ZNF860A6NHJ4 632 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 TUBAL3A6NHL2 446 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 MAGEB17A8MXT2 336 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 G3V3Y1 287 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 BCKDKO14874 412 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 DNAJB6O75190 326 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 CELA3AP09093 270 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 BMP5P22003 454 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 PEX19P40855 299 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 CBLBQ13191 982 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 NR1I3Q14994 352 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 TMED2Q15363 201 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.95□□□□□ -0.66
CLK3-222ENST00000568232 C1orf185Q5T7R7 199 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 KCTD11Q693B1 232 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 ZNF534Q76KX8 674 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 PCGF5Q86SE9 256 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 TMEM156Q8N614 296 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 OR5T3Q8NGG3 340 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 ZCCHC10Q8TBK6 192 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 SMPDL3AQ92484 453 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 RNASE6Q93091 150 aaKnown RBP10.95□□□□□ -0.66
CLK3-222ENST00000568232 DEFB126Q9BYW3 111 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 TTTY12Q9BZ98 90 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 TRMT1Q9NXH9 659 aaKnown RBP10.95□□□□□ -0.66
CLK3-222ENST00000568232 ACAD8Q9UKU7 415 aa10.95□□□□□ -0.66
CLK3-222ENST00000568232 OR14I1A6ND48 311 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 CLCA1A8K7I4 914 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 A8MUA0 341 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 F8W8V4 182 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 H7BY64 318 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 SPOPO43791 374 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 ERGP11308 486 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 CCNFP41002 786 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 MAGEA5P43359 124 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 MARCKSL1P49006 195 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 ZBED6P86452 979 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 MPP1Q00013 466 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 HYAL2Q12891 473 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 RIPPLY2Q5TAB7 128 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 TMEM214Q6NUQ4 689 aaKnown RBP10.94□□□□□ -0.66
CLK3-222ENST00000568232 SEM1Q6ZVN7 128 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 TRILQ7L0X0 811 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 KLHDC8BQ8IXV7 354 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 KCT2Q8NC54 265 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 NAXEQ8NCW5 288 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 NFAM1Q8NET5 270 aaPredicted RBP10.94□□□□□ -0.66
CLK3-222ENST00000568232 OR2M7Q8NG81 312 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 OR9A1PQ8NGU1 263 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 OR4L1Q8NH43 312 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 ZNF592Q92610 1267 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 KIAA1191Q96A73 305 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 ZNF778Q96MU6 729 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 PRAP1Q96NZ9 151 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 TTC1Q99614 292 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 BDH2Q9BUT1 245 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 GOLPH3Q9H4A6 298 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 B4GALT7Q9UBV7 327 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 DRG1Q9Y295 367 aaKnown RBP10.94□□□□□ -0.66
CLK3-222ENST00000568232 NAALAD2Q9Y3Q0 740 aa10.94□□□□□ -0.66
CLK3-222ENST00000568232 ANK2Q01484 3957 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 ZNF407Q9C0G0 2248 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 A0A1B0GVC2 190 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 APOC4-APOC2K7ER74 178 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 B4GALT2O60909 372 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 WDR1O75083 606 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 ITGA10O75578 1167 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 METTL18O95568 372 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 IGHG3P01860 377 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 APOC2P02655 101 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 HRGP04196 525 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 TUBB4AP04350 444 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 SLC1A1P43005 524 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 ASCL1P50553 236 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 WNT3P56703 355 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 BTG2P78543 158 aa10.93□□□□□ -0.66
CLK3-222ENST00000568232 RELAQ04206 551 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms