RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 Q4G0T1 1027 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 TMEM35AQ53FP2 167 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 SPDYCQ5MJ68 293 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 TEX35Q5T0J7 233 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 C10orf25Q5T742 122 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 CYP4A22Q5TCH4 519 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 LYSMD4Q5XG99 296 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 IRGCQ6NXR0 463 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 LINGO4Q6UY18 593 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 DLEU7Q6UYE1 221 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 YTHDF3Q7Z739 585 aaKnown RBP5.42□□□□□ -1.54
KARS-208ENST00000566772 MMD2Q8IY49 270 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 SLC24A4Q8NFF2 622 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 SPATA18Q8TC71 538 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 C3orf30Q96M34 536 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 FAM20AQ96MK3 541 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 ERP44Q9BS26 406 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 PRSS22Q9GZN4 317 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 ARRDC1-AS1Q9H2J1 176 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 EBF3Q9H4W6 596 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 PALMDQ9NP74 551 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 TUBA8Q9NY65 449 aaPredicted RBP5.42□□□□□ -1.54
KARS-208ENST00000566772 DAPK2Q9UIK4 370 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 AGO1Q9UL18 857 aaKnown RBP5.42□□□□□ -1.54
KARS-208ENST00000566772 AMDHD2Q9Y303 409 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 KIAA1551Q9HCM1 1747 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 ANKRD26Q9UPS8 1709 aa5.42□□□□□ -1.54
KARS-208ENST00000566772 KIAA1217Q5T5P2 1943 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 COL5A3P25940 1745 aaPredicted RBP5.41□□□□□ -1.54
KARS-208ENST00000566772 TMEM129A0AVI4 362 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 ANKDD1BA6NHY2 528 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 F8WDY8 70 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 GAPDHSO14556 408 aaPredicted RBP5.41□□□□□ -1.54
KARS-208ENST00000566772 MCF2LO15068 1137 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 PSMD3O43242 534 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 SPRY3O43610 288 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 BUD23O43709 281 aaKnown RBP5.41□□□□□ -1.54
KARS-208ENST00000566772 ATP6V1G1O75348 118 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 CLDN14O95500 239 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 APBB3O95704 486 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 LIPFP07098 398 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 CSF2RAP15509 400 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 POLR2CP19387 275 aaPredicted RBP5.41□□□□□ -1.54
KARS-208ENST00000566772 ELAVL4P26378 380 aaKnown RBP5.41□□□□□ -1.54
KARS-208ENST00000566772 RFC4P35249 363 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 AMTP48728 403 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 CX3CL1P78423 397 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 EEF1A2Q05639 463 aaKnown RBP5.41□□□□□ -1.54
KARS-208ENST00000566772 CACNG1Q06432 222 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 IL10RBQ08334 325 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 ABRQ12979 859 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 MYBPHQ13203 477 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 SCGB2A2Q13296 93 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 SGCGQ13326 291 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 ITPK1Q13572 414 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 ACKR1Q16570 336 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 RBBP7Q16576 425 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 SPATS1Q496A3 300 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 NDUFAF5Q5TEU4 345 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 AFTPHQ6ULP2 937 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 CCNI2Q6ZMN8 369 aaPredicted RBP5.41□□□□□ -1.54
KARS-208ENST00000566772 TMEM139Q8IV31 216 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.41□□□□□ -1.54
KARS-208ENST00000566772 RNF113BQ8IZP6 322 aaKnown RBP5.41□□□□□ -1.54
KARS-208ENST00000566772 LGI2Q8N0V4 545 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 THEM5Q8N1Q8 247 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 PGBD5Q8N414 524 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 BANPQ8N9N5 519 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 CCDC63Q8NA47 563 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 PPFIBP2Q8ND30 876 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 OR11H4Q8NGC9 324 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 OR4A16Q8NH70 328 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 SLC26A7Q8TE54 656 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 SLC20A1Q8WUM9 679 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 GGHQ92820 318 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 TSSK2Q96PF2 358 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 TESK2Q96S53 571 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 SLC25A33Q9BSK2 321 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 TRAF4Q9BUZ4 470 aaPredicted RBP5.41□□□□□ -1.54
KARS-208ENST00000566772 TRMT61BQ9BVS5 477 aaKnown RBP5.41□□□□□ -1.54
KARS-208ENST00000566772 WWTR1Q9GZV5 400 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 NT5C3AQ9H0P0 336 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 ECT2Q9H8V3 914 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 TRPC7Q9HCX4 862 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 PPANQ9NQ55 473 aaKnown RBP5.41□□□□□ -1.54
KARS-208ENST00000566772 PIGVQ9NUD9 493 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 PTTG2Q9NZH5 202 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 ZNF624Q9P2J8 865 aaPredicted RBP5.41□□□□□ -1.54
KARS-208ENST00000566772 SH3GLB1Q9Y371 365 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 OR2W1Q9Y3N9 320 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 TAF1P21675 1872 aa5.41□□□□□ -1.54
KARS-208ENST00000566772 TNRC6CQ9HCJ0 1690 aaKnown RBP5.4□□□□□ -1.54
KARS-208ENST00000566772 C10orf71Q711Q0 1435 aa5.4□□□□□ -1.54
KARS-208ENST00000566772 KCPQ6ZWJ8 1503 aa5.4□□□□□ -1.54
KARS-208ENST00000566772 ARFGEF1Q9Y6D6 1849 aa5.4□□□□□ -1.54
KARS-208ENST00000566772 RPS10-NUDT3A0A1W2PQS6 291 aa5.4□□□□□ -1.54
KARS-208ENST00000566772 GPR89AB7ZAQ6 455 aa5.4□□□□□ -1.54
KARS-208ENST00000566772 INAFM1C9JVW0 142 aa5.4□□□□□ -1.54
KARS-208ENST00000566772 E9PI62 339 aa5.4□□□□□ -1.54
KARS-208ENST00000566772 MID1O15344 667 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms