RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ACSM2AQ08AH3 577 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 NPRL3Q12980 569 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 DHCR24Q15392 516 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 TEAD4Q15561 434 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 UBE2UQ5VVX9 321 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 ACSM2BQ68CK6 577 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 NPAS3Q8IXF0 933 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 OR10Q1Q8NGQ4 319 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 CXorf40BQ96DE9 158 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 HRASLS5Q96KN8 279 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 LRRC3BQ96PB8 259 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 DUSP26Q9BV47 211 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 PLCXD1Q9NUJ7 323 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 ADPRHL2Q9NX46 363 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 OBP2AQ9NY56 170 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 B4GALT6Q9UBX8 382 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 PCDHGB3Q9Y5G1 929 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 MYO9BQ13459 2157 aa16.16■□□□□ 0.18
CMTM3-213ENST00000566756 C1orf226A1L170 272 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 hCG_2039718K7EN88 272 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 HOXC11O43248 304 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-213ENST00000566756 FAM20BO75063 409 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 ITPKAP23677 461 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 PCGF2P35227 344 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 STK19P49842 368 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-213ENST00000566756 E2F2Q14209 437 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 LAIR1Q6GTX8 287 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 THOC6Q86W42 341 aaKnown RBP16.15■□□□□ 0.18
CMTM3-213ENST00000566756 ATG16L2Q8NAA4 619 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 OR6Q1Q8NGQ2 317 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 COQ8BQ96D53 544 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 ASB16Q96NS5 453 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 NEURL2Q9BR09 285 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 BOLA2-SMG1P6H3BVE0 249 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 SERPINB7O75635 380 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 CYP2A6P11509 494 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-213ENST00000566756 CD22P20273 847 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 HKDC1Q2TB90 917 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 XKR6Q5GH73 641 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 C10orf62Q5T681 223 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-213ENST00000566756 BRAT1Q6PJG6 821 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 RFLNAQ6ZTI6 216 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 VTCN1Q7Z7D3 282 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 MFSD4AQ8N468 514 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 ELMO1Q92556 727 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 SMARCD2Q92925 531 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 GLMNQ92990 594 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 MRPL38Q96DV4 380 aaKnown RBP16.15■□□□□ 0.18
CMTM3-213ENST00000566756 EBPLQ9BY08 206 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 TRPV4Q9HBA0 871 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 SIRT5Q9NXA8 310 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 GDE1Q9NZC3 331 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 SELENONQ9NZV5 590 aa16.15■□□□□ 0.18
CMTM3-213ENST00000566756 OR2A25A4D2G3 310 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 EPOPA6NHQ4 379 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 A8MVJ9 347 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 SUV39H1O43463 412 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 SGTAO43765 313 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 CYP17A1P05093 508 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 CYP4B1P13584 511 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 POLR2EP19388 210 aaKnown RBP16.14■□□□□ 0.17
CMTM3-213ENST00000566756 FSHRP23945 695 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 KRT20P35900 424 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 HPCAL1P37235 193 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 MAP2K4P45985 399 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 TUBA1BP68363 451 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 RPP38P78345 283 aaKnown RBP16.14■□□□□ 0.17
CMTM3-213ENST00000566756 KCNJ10P78508 379 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 CAMK2GQ13555 558 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-213ENST00000566756 HIST2H2ACQ16777 129 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-213ENST00000566756 SPIN4Q56A73 249 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 FAM78AQ5JUQ0 283 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 DPY19L3Q6ZPD9 716 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 TUBA1AQ71U36 451 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 ZBTB46Q86UZ6 589 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 SLC22A15Q8IZD6 547 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 FGF13Q92913 245 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 RSPRY1Q96DX4 576 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 ATAD3AQ9NVI7 634 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 ZNF282Q9UDV7 671 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-213ENST00000566756 MBD1Q9UIS9 605 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-213ENST00000566756 ERVK-11Q9UQG0 969 aa16.14■□□□□ 0.17
CMTM3-213ENST00000566756 RNASET2O00584 256 aaKnown RBP16.13■□□□□ 0.17
CMTM3-213ENST00000566756 WBP4O75554 376 aaKnown RBP16.13■□□□□ 0.17
CMTM3-213ENST00000566756 NADKO95544 446 aaPredicted RBP16.13■□□□□ 0.17
CMTM3-213ENST00000566756 CPSF4O95639 269 aaKnown RBP16.13■□□□□ 0.17
CMTM3-213ENST00000566756 ADH1CP00326 375 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 CISD3P0C7P0 127 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 LAMP1P11279 417 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 ADH5P11766 374 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 NR4A1P22736 598 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 PSMB9P28065 219 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 VIPR1P32241 457 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 UGT2B10P36537 528 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 CBX3Q13185 183 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 DOC2AQ14183 400 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 CPTPQ5TA50 214 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 TMEM215Q68D42 235 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 GDPD4Q6W3E5 623 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 ADCK1Q86TW2 530 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms