RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 IGSF8Q969P0 613 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 WBP1Q96G27 269 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 GRAMD2BQ96HH9 432 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 ZNF570Q96NI8 536 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 SIKE1Q9BRV8 207 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 TMEM9BQ9NQ34 198 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 ANKEF1Q9NU02 776 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 CLIC5Q9NZA1 410 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 CARD8Q9Y2G2 431 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 INAFM1C9JVW0 142 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 K7ENM7 598 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 PDLIM1O00151 329 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 DNALI1O14645 258 aaPredicted RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 SCGB1D1O95968 90 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 PTPN2P17706 415 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 NMT1P30419 496 aaKnown RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 NLRP11P59045 1033 aaKnown RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 SARNPP82979 210 aaKnown RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 ROR2Q01974 943 aaKnown RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 SP4Q02446 784 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 KLC1Q07866 573 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 ITGADQ13349 1161 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 PLD1Q13393 1074 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 PTGR1Q14914 329 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 TRIP6Q15654 476 aaKnown RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 DLG2Q15700 870 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 ACCSLQ4AC99 568 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 MORN5Q5VZ52 161 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 AP1ARQ63HQ0 302 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 TWF2Q6IBS0 349 aaKnown RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 CENPUQ71F23 418 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 GALNT5Q7Z7M9 940 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 RBFAQ8N0V3 343 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 ELMOD1Q8N336 334 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 PPFIBP2Q8ND30 876 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 FBXL13Q8NEE6 735 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 ZMIZ2Q8NF64 920 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 RAB3IL1Q8TBN0 382 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 SPDL1Q96EA4 605 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 BICD1Q96G01 975 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 MKKSQ9NPJ1 570 aaPredicted RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 TUBA8Q9NY65 449 aaPredicted RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 TAS2R14Q9NYV8 317 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 CPSF2Q9P2I0 782 aaKnown RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 PSMC3IPQ9P2W1 217 aaPredicted RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 AAR2Q9Y312 384 aaKnown RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 PTRH2Q9Y3E5 179 aaKnown RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 CEPT1Q9Y6K0 416 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 EXOC1LA0A1B0GW35 172 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 ENO4A6NNW6 628 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 KLF11O14901 512 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 ALOX15BO15296 676 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 CHADO15335 359 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 PEX11AO75192 247 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 SF3B1O75533 1304 aaKnown RBP eCLIP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 ERAL1O75616 437 aaKnown RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 ACSL3O95573 720 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 RPSAP08865 295 aaKnown RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 TRIM49P0CI25 452 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 TRIM49CP0CI26 452 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 TPBGLP0DKB5 382 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 RRM1P23921 792 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 TBXAS1P24557 533 aaPredicted RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 MAGEA4P43358 317 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 AP3M2P53677 418 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 ABATP80404 500 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 XIAPP98170 497 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 DSC1Q08554 894 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 HHATQ5VTY9 493 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 DCAF12L2Q5VW00 463 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 C2orf16Q68DN1 1984 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 HEPHL1Q6MZM0 1159 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 PARM1Q6UWI2 310 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 DENND5BQ6ZUT9 1274 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 SDCCAG8Q86SQ7 713 aaPredicted RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 PHF13Q86YI8 300 aaPredicted RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 C4orf19Q8IY42 314 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 MCOLN2Q8IZK6 566 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 SLC20A1Q8WUM9 679 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 FGF13Q92913 245 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 SNAPC3Q92966 411 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 THOC1Q96FV9 657 aaKnown RBP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 EDEM2Q9BV94 578 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 FAM96AQ9H5X1 160 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 PPP1R3EQ9H7J1 279 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 PCDH9Q9HC56 1237 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 POLD4Q9HCU8 107 aa4.06□□□□□ -1.76
LINC00561-201ENST00000565815 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.06□□□□□ -1.76
LINC00561-201ENST00000565815 ARHGEF37A1IGU5 675 aa4.05□□□□□ -1.76
LINC00561-201ENST00000565815 SYNDIG1LA6NDD5 238 aa4.05□□□□□ -1.76
LINC00561-201ENST00000565815 TMEM247A6NEH6 219 aa4.05□□□□□ -1.76
LINC00561-201ENST00000565815 SMIM23A6NLE4 172 aa4.05□□□□□ -1.76
LINC00561-201ENST00000565815 B4DGG1 531 aa4.05□□□□□ -1.76
LINC00561-201ENST00000565815 F5H0A9 414 aaPredicted RBP4.05□□□□□ -1.76
LINC00561-201ENST00000565815 CLDN3O15551 220 aa4.05□□□□□ -1.76
LINC00561-201ENST00000565815 MAGEC1O60732 1142 aa4.05□□□□□ -1.76
LINC00561-201ENST00000565815 ATP9AO75110 1047 aa4.05□□□□□ -1.76
LINC00561-201ENST00000565815 TPPPO94811 219 aa4.05□□□□□ -1.76
LINC00561-201ENST00000565815 LSM8O95777 96 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms