RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 OR2L2Q8NH16 312 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 GTF3AQ92664 365 aaKnown RBP3.61□□□□□ -1.83
CHD9-212ENST00000564641 FAM81BQ96LP2 452 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 ADPGKQ9BRR6 497 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 ANKRD2Q9GZV1 360 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 UPF3AQ9H1J1 476 aaKnown RBP3.61□□□□□ -1.83
CHD9-212ENST00000564641 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.61□□□□□ -1.83
CHD9-212ENST00000564641 CWC25Q9NXE8 425 aaPredicted RBP3.61□□□□□ -1.83
CHD9-212ENST00000564641 MIS18AQ9NYP9 233 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 CPSF2Q9P2I0 782 aaKnown RBP3.61□□□□□ -1.83
CHD9-212ENST00000564641 GRID1Q9ULK0 1009 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 DDX19BQ9UMR2 479 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 CCL27Q9Y4X3 112 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 MAGED1Q9Y5V3 778 aaPredicted RBP3.61□□□□□ -1.83
CHD9-212ENST00000564641 UBN2Q6ZU65 1347 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 COL1A1P02452 1464 aaPredicted RBP3.6□□□□□ -1.83
CHD9-212ENST00000564641 PRSS51A0A1B0GVH4 220 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 OR2A25A4D2G3 310 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 TMCO5BA8MYB1 307 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 PI4K2BG5E9Z4 385 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 PAPSS1O43252 624 aaPredicted RBP3.6□□□□□ -1.83
CHD9-212ENST00000564641 PI15O43692 258 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 TBX10O75333 385 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 DFFBO76075 338 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 PCCAP05165 728 aaPredicted RBP3.6□□□□□ -1.83
CHD9-212ENST00000564641 GPIP06744 558 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 CA4P22748 312 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 PON1P27169 355 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 NRIP1P48552 1158 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 PGFP49763 221 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 ZNF75DP51815 510 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 PNLIPRP2P54317 469 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 UBE2HP62256 183 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 PPP2R2BQ00005 443 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 PRPF4BQ13523 1007 aaKnown RBP3.6□□□□□ -1.83
CHD9-212ENST00000564641 ENPP2Q13822 863 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 NECTIN1Q15223 517 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 GRTP1Q5TC63 336 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 CST9Q5W186 159 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 ZSCAN25Q6NSZ9 544 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 SCYL3Q8IZE3 742 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 DCLK2Q8N568 766 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 TDRD5Q8NAT2 981 aaKnown RBP3.6□□□□□ -1.83
CHD9-212ENST00000564641 AVL9Q8NBF6 648 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 POGLUT1Q8NBL1 392 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 OR4C3Q8NH37 302 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 RNF128Q8TEB7 428 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 ARHGAP45Q92619 1136 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 PLEKHF1Q96S99 279 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 VN1R1Q9GZP7 353 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 COA1Q9GZY4 146 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 ZSCAN16Q9H4T2 348 aaPredicted RBP3.6□□□□□ -1.83
CHD9-212ENST00000564641 DBNDD1Q9H9R9 158 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 MYOZ2Q9NPC6 264 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 TAB2Q9NYJ8 693 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 CLIP2Q9UDT6 1046 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.6□□□□□ -1.83
CHD9-212ENST00000564641 ELP1O95163 1332 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 PAPPA2Q9BXP8 1791 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 MED23Q9ULK4 1368 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 MYH3P11055 1940 aa3.6□□□□□ -1.83
CHD9-212ENST00000564641 LRRC37AA6NMS7 1700 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 LAMB2P55268 1798 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 TO15178 435 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 IPO8O15397 1037 aaKnown RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 AP5Z1O43299 807 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 SSX4O60224 188 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 RNASEH1O60930 286 aaKnown RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 TBCAO75347 108 aaKnown RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 ERLIN2O94905 339 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 DUS4LO95620 317 aaKnown RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 HSPA4LO95757 839 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 GCFC2P16383 781 aaKnown RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 CASTP20810 708 aaKnown RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 CTNNA1P35221 906 aaKnown RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 ZNF41P51814 821 aaPredicted RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 PSMC6P62333 389 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 CX3CL1P78423 397 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 TFCP2Q12800 502 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 DRP2Q13474 957 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 MELKQ14680 651 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 PDLIM3Q53GG5 364 aaPredicted RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 C9orf152Q5JTZ5 239 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 CCDC158Q5M9N0 1113 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 OLFM4Q6UX06 510 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 SLFN11Q7Z7L1 901 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 LACC1Q8IV20 430 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 LINC00346Q8IVM7 164 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 MINDY1Q8N5J2 469 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 MAPKAPK5-AS1Q8N8E1 139 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 PAPD5Q8NDF8 572 aaKnown RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 PRSS33Q8NF86 280 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 OMA1Q96E52 524 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 ARSGQ96EG1 525 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 SAT2Q96F10 170 aaPredicted RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 PGAP3Q96FM1 320 aaPredicted RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 SPATA17Q96L03 361 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 SH3GL3Q99963 347 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 TRIM6Q9C030 488 aaPredicted RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 ARRDC1-AS1Q9H2J1 176 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms