RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 PRM3Q9NNZ6 103 aa17.94■□□□□ 0.46
SPNS1-206ENST00000564476 NPHS2Q9NP85 383 aa17.94■□□□□ 0.46
SPNS1-206ENST00000564476 FARSBQ9NSD9 589 aaKnown RBP17.94■□□□□ 0.46
SPNS1-206ENST00000564476 CCL27Q9Y4X3 112 aa17.94■□□□□ 0.46
SPNS1-206ENST00000564476 LRIT2A6NDA9 550 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 CASC3O15234 703 aaKnown RBP17.93■□□□□ 0.46
SPNS1-206ENST00000564476 NRP2O60462 931 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 SKAP2O75563 359 aaPredicted RBP17.93■□□□□ 0.46
SPNS1-206ENST00000564476 RSL1D1O76021 490 aaKnown RBP17.93■□□□□ 0.46
SPNS1-206ENST00000564476 SEMA3DO95025 777 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 MT-CO3P00414 261 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 FTH1P19P0C7X4 201 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 TSFMP43897 325 aaKnown RBP17.93■□□□□ 0.46
SPNS1-206ENST00000564476 RPS13P62277 151 aaKnown RBP17.93■□□□□ 0.46
SPNS1-206ENST00000564476 SIM1P81133 766 aaPredicted RBP17.93■□□□□ 0.46
SPNS1-206ENST00000564476 TGM3Q08188 693 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 CYP4F3Q08477 520 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 DDX39BQ13838 428 aaKnown RBP17.93■□□□□ 0.46
SPNS1-206ENST00000564476 IL11RAQ14626 422 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 ISXQ2M1V0 245 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 WASHC2DQ5SRD0 308 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 YOD1Q5VVQ6 348 aaPredicted RBP17.93■□□□□ 0.46
SPNS1-206ENST00000564476 GARNL3Q5VVW2 1013 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 KHDRBS2Q5VWX1 349 aaKnown RBP17.93■□□□□ 0.46
SPNS1-206ENST00000564476 NIPAL1Q6NVV3 410 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 ACAD11Q709F0 780 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 PIGWQ7Z7B1 504 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 CEP70Q8NHQ1 597 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 ACTRT2Q8TDY3 377 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 PRR11Q96HE9 360 aaPredicted RBP17.93■□□□□ 0.46
SPNS1-206ENST00000564476 CMKLR1Q99788 373 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 CCDC28BQ9BUN5 200 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 MS4A8Q9BY19 250 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 ACPTQ9BZG2 426 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 SLC6A16Q9GZN6 736 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 FGF21Q9NSA1 209 aa17.93■□□□□ 0.46
SPNS1-206ENST00000564476 FITM1A5D6W6 292 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 NDUFS4O43181 175 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 SNX3O60493 162 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 TGFB1P01137 390 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 ARFIP2P53365 341 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 VSX2P58304 361 aaPredicted RBP17.92■□□□□ 0.46
SPNS1-206ENST00000564476 IRX1P78414 480 aaPredicted RBP17.92■□□□□ 0.46
SPNS1-206ENST00000564476 MAD2L1Q13257 205 aaPredicted RBP17.92■□□□□ 0.46
SPNS1-206ENST00000564476 EIF3IQ13347 325 aaKnown RBP17.92■□□□□ 0.46
SPNS1-206ENST00000564476 GRM7Q14831 915 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 PRTGQ2VWP7 1150 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 FAM214AQ32MH5 1076 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 CCDC157Q569K6 752 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 METTL21CQ5VZV1 264 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 FRMPD2BQ6IN97 320 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 TLDC1Q6P9B6 456 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 MAVSQ7Z434 540 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 SPATA21Q7Z572 469 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 TMPRSS12Q86WS5 348 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 GPR135Q8IZ08 494 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 CSNK1A1LQ8N752 337 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 RGMAQ96B86 450 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 TUBGCP3Q96CW5 907 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 LIN37Q96GY3 246 aaPredicted RBP17.92■□□□□ 0.46
SPNS1-206ENST00000564476 FCRL4Q96PJ5 515 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 ELAC2Q9BQ52 826 aaKnown RBP17.92■□□□□ 0.46
SPNS1-206ENST00000564476 ROGDIQ9GZN7 287 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 KCNK13Q9HB14 408 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 SIRT5Q9NXA8 310 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 SLC12A4Q9UP95 1085 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 TMED5Q9Y3A6 229 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 ADAMTS20P59510 1910 aa17.92■□□□□ 0.46
SPNS1-206ENST00000564476 LOC105369274A0A096LPK9 316 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 LOC102723532A0A0G2JNH3 316 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 B4E171 279 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 SDHDO14521 159 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 DIAPH2O60879 1101 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 JUNP05412 331 aaKnown RBP17.91■□□□□ 0.46
SPNS1-206ENST00000564476 SERPIND1P05546 499 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 ACPPP15309 386 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 FOLR1P15328 257 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 TSPAN7P41732 249 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 IDH3AP50213 366 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 NOVA1P51513 510 aaKnown RBP17.91■□□□□ 0.46
SPNS1-206ENST00000564476 CYP4F2P78329 520 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 NDUFA9Q16795 377 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 ATP6AP1LQ52LC2 224 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 SPIN4Q56A73 249 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 FAM219BQ5XKK7 198 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 SCIMPQ6UWF3 145 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 DHRS13Q6UX07 377 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 B3GNT8Q7Z7M8 397 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 OR4N4Q8N0Y3 316 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 RCBTB1Q8NDN9 531 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 GAL3ST3Q96A11 431 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 ZNF501Q96CX3 271 aaPredicted RBP17.91■□□□□ 0.46
SPNS1-206ENST00000564476 C3orf30Q96M34 536 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 QRFPRQ96P65 431 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 TBCDQ9BTW9 1192 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 REXO4Q9GZR2 422 aaKnown RBP17.91■□□□□ 0.46
SPNS1-206ENST00000564476 FBXO8Q9NRD0 319 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 C1orf109Q9NX04 203 aa17.91■□□□□ 0.46
SPNS1-206ENST00000564476 SIDT1Q9NXL6 827 aaKnown RBP17.91■□□□□ 0.46
SPNS1-206ENST00000564476 DCTN4Q9UJW0 460 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms