RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 PRAG1Q86YV5 1406 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 UBA6A0AVT1 1052 aaPredicted RBP4.59□□□□□ -1.68
SMG1-207ENST00000563235 TRIM77I1YAP6 450 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 GRID2O43424 1007 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 HS6ST1O60243 411 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 DHFRP00374 187 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 OR2T7P0C7T2 308 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 GIMD1P0DJR0 217 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 MAPTP10636 758 aaKnown RBP4.59□□□□□ -1.68
SMG1-207ENST00000563235 ZNF7P17097 686 aaPredicted RBP4.59□□□□□ -1.68
SMG1-207ENST00000563235 TPH1P17752 444 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 RAB4AP20338 218 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 FPR1P21462 350 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 EPHA1P21709 976 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 MAOBP27338 520 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 PSMB4P28070 264 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 NTSR1P30989 418 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 HNRNPH3P31942 346 aaKnown RBP4.59□□□□□ -1.68
SMG1-207ENST00000563235 CAPZBP47756 277 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 CCR8P51685 355 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 CLCN3P51790 818 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 MLF1P58340 268 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 ZFP36L1Q07352 338 aaKnown RBP4.59□□□□□ -1.68
SMG1-207ENST00000563235 ELAVL3Q14576 367 aaKnown RBP4.59□□□□□ -1.68
SMG1-207ENST00000563235 SHBQ15464 509 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 ETFDHQ16134 617 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 KCNMB1Q16558 191 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 GTDC1Q4AE62 458 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 KLHL22Q53GT1 634 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 ZNF789Q5FWF6 425 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 IL23RQ5VWK5 629 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 TTC23Q5W5X9 447 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 CYB5R2Q6BCY4 276 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 GRAMD4Q6IC98 578 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 DLEU7Q6UYE1 221 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 SLC39A5Q6ZMH5 540 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 YTHDF3Q7Z739 585 aaKnown RBP4.59□□□□□ -1.68
SMG1-207ENST00000563235 ADIPOR2Q86V24 386 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 KIRREL3Q8IZU9 778 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 NETO2Q8NC67 525 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 SLC17A8Q8NDX2 589 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 BEST2Q8NFU1 509 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 RHEBL1Q8TAI7 183 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 NSMAFQ92636 917 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 SLC25A36Q96CQ1 311 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 CMTM5Q96DZ9 223 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 LCORQ96JN0 433 aaPredicted RBP4.59□□□□□ -1.68
SMG1-207ENST00000563235 HEXIM2Q96MH2 286 aaKnown RBP4.59□□□□□ -1.68
SMG1-207ENST00000563235 TAAR6Q96RI8 345 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 TAAR1Q96RJ0 339 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 PAPOLGQ9BWT3 736 aaKnown RBP4.59□□□□□ -1.68
SMG1-207ENST00000563235 SLCO5A1Q9H2Y9 848 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 SAV1Q9H4B6 383 aaPredicted RBP4.59□□□□□ -1.68
SMG1-207ENST00000563235 CCDC134Q9H6E4 229 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 MEAF6Q9HAF1 191 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 VAT1LQ9HCJ6 419 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 APMAPQ9HDC9 416 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 GTSE1Q9NYZ3 720 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 DNAI1Q9UI46 699 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 SNX7Q9UNH6 387 aa4.59□□□□□ -1.68
SMG1-207ENST00000563235 ABCC4O15439 1325 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 ATP10DQ9P241 1426 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 ARHGEF28Q8N1W1 1705 aaKnown RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 FABP12A6NFH5 140 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 ERI2A8K979 691 aaKnown RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 FADS2P1A8MWK0 482 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 DLGAP1O14490 977 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 SLC9A3R1O14745 358 aaPredicted RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 TOX3O15405 576 aaPredicted RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 SRGAP3O43295 1099 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 DUX1O43812 170 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 FARP2O94887 1054 aaPredicted RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 ALDOAP04075 364 aaKnown RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 CD1AP06126 327 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 ALPIP09923 528 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 PIM1P11309 404 aaPredicted RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 TOB1P50616 345 aaPredicted RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 RIDAP52758 137 aaKnown RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 RPL23AP62750 156 aaKnown RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 RPL10AP62906 217 aaKnown RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 PPP1R8Q12972 351 aaKnown RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 UAP1Q16222 522 aaPredicted RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 YIF1BQ5BJH7 314 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 SEL1L2Q5TEA6 688 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 SLFN12LQ6IEE8 588 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 C3orf33Q6P1S2 294 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 RP9Q8TA86 221 aaKnown RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 GTF3AQ92664 365 aaKnown RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 FBXO17Q96EF6 278 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 HHIPL1Q96JK4 782 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 TSSK3Q96PN8 268 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 DUX5Q96PT3 197 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 C6orf62Q9GZU0 229 aaPredicted RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 TMEM168Q9H0V1 697 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 CATSPERBQ9H7T0 1116 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 IMP3Q9NV31 184 aaKnown RBP4.58□□□□□ -1.68
SMG1-207ENST00000563235 ADAM22Q9P0K1 906 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 CIDEBQ9UHD4 219 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 PSMD13Q9UNM6 376 aa4.58□□□□□ -1.68
SMG1-207ENST00000563235 ZNF644Q9H582 1327 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms