RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 UBXN8O00124 270 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 FOXS1O43638 330 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 SEMA7AO75326 666 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 VPS4BO75351 444 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 H2AFYO75367 372 aaKnown RBP15.72■□□□□ 0.11
CDT1-202ENST00000562747 SORBS2O94875 1100 aaKnown RBP15.72■□□□□ 0.11
CDT1-202ENST00000562747 SLU7O95391 586 aaKnown RBP15.72■□□□□ 0.11
CDT1-202ENST00000562747 ATXN8OSP0DMR3 200 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 C1GALT1C1LP0DN25 315 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 COL6A2P12110 1019 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 MTHFD2P13995 350 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 FBLP22087 321 aaKnown RBP15.72■□□□□ 0.11
CDT1-202ENST00000562747 GCAP28676 217 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 SCTRP47872 440 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 GLRBP48167 497 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 PWP1Q13610 501 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 DSG2Q14126 1118 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 TSNAXIP1Q2TAA8 658 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 PRR30Q53SZ7 412 aaPredicted RBP15.72■□□□□ 0.11
CDT1-202ENST00000562747 ATG9BQ674R7 924 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 SLCO4C1Q6ZQN7 724 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 LRRC70Q7Z2Q7 622 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 ZNF740Q8NDX6 193 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 UBTD2Q8WUN7 234 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 ESAMQ96AP7 390 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 NACC2Q96BF6 587 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 SPSB2Q99619 263 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 CCDC77Q9BR77 488 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 CD244Q9BZW8 370 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 PITHD1Q9GZP4 211 aaPredicted RBP15.72■□□□□ 0.11
CDT1-202ENST00000562747 SPNS1Q9H2V7 528 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 EHD1Q9H4M9 534 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 CTSFQ9UBX1 484 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 ZNF282Q9UDV7 671 aaPredicted RBP15.72■□□□□ 0.11
CDT1-202ENST00000562747 VPS4AQ9UN37 437 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 NOTCH2Q04721 2471 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 A0A0A6YYC8 382 aaPredicted RBP15.71■□□□□ 0.11
CDT1-202ENST00000562747 H0YIG0 161 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 I3L1I5 382 aaPredicted RBP15.71■□□□□ 0.11
CDT1-202ENST00000562747 MAP2K7O14733 419 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 CLGNO14967 610 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 NDUFS4O43181 175 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 CCNT2O60583 730 aaKnown RBP15.71■□□□□ 0.11
CDT1-202ENST00000562747 NSA2O95478 260 aaKnown RBP15.71■□□□□ 0.11
CDT1-202ENST00000562747 STATHP02808 62 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 UMODP07911 640 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 AVPR1BP47901 424 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 OCA2Q04671 838 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 PDK4Q16654 411 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 FBXO48Q5FWF7 155 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 TIFABQ6ZNK6 161 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 TRPV3Q8NET8 790 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 NT5CQ8TCD5 201 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 MMABQ96EY8 250 aaPredicted RBP15.71■□□□□ 0.11
CDT1-202ENST00000562747 COPG2Q9UBF2 871 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 MAP4K5Q9Y4K4 846 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 SLC22A7Q9Y694 548 aa15.71■□□□□ 0.11
CDT1-202ENST00000562747 IQANK1A0A1B0GTG1 560 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 ARGFXA6NJG6 315 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 KLK8O60259 260 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 IGHEP01854 428 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 RBP1P09455 135 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 VARSP26640 1264 aaKnown RBP15.7■□□□□ 0.1
CDT1-202ENST00000562747 GSTM2P28161 218 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 OTX2P32243 289 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 PGDP52209 483 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 ALDH18A1P54886 795 aaKnown RBP15.7■□□□□ 0.1
CDT1-202ENST00000562747 RGS1Q08116 209 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 RBBP5Q15291 538 aaKnown RBP15.7■□□□□ 0.1
CDT1-202ENST00000562747 TECRLQ5HYJ1 363 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 FHL5Q5TD97 284 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 NIPAL1Q6NVV3 410 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 MED25Q71SY5 747 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 MRGPREQ86SM8 312 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 KRT78Q8N1N4 520 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 PLD6Q8N2A8 252 aaKnown RBP15.7■□□□□ 0.1
CDT1-202ENST00000562747 EFCAB3Q8N7B9 438 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 AMER3Q8N944 861 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 TMEM102Q8N9M5 508 aaPredicted RBP15.7■□□□□ 0.1
CDT1-202ENST00000562747 SNX31Q8N9S9 440 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 ANKRD53Q8N9V6 530 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 KCT2Q8NC54 265 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 TTLQ8NG68 377 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 STT3BQ8TCJ2 826 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 MIEF2Q96C03 454 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 WDR34Q96EX3 536 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 SEC16BQ96JE7 1060 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 MACROD1Q9BQ69 325 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 SLC25A23Q9BV35 468 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 NT5DC2Q9H857 520 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 ANKHQ9HCJ1 492 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 MLXIPLQ9NP71 852 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 MKKSQ9NPJ1 570 aaPredicted RBP15.7■□□□□ 0.1
CDT1-202ENST00000562747 SEMA3GQ9NS98 782 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 C14orf105Q9NVL8 296 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 PSMC3IPQ9P2W1 217 aaPredicted RBP15.7■□□□□ 0.1
CDT1-202ENST00000562747 OPTCQ9UBM4 332 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 MRPS2Q9Y399 296 aaKnown RBP15.7■□□□□ 0.1
CDT1-202ENST00000562747 CCDC88CQ9P219 2028 aa15.7■□□□□ 0.1
CDT1-202ENST00000562747 URADA6NGE7 173 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms