RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 TDRPQ86YL5 185 aa15.59■□□□□ 0.09
PKD1-226ENST00000562425 ARHGEF39Q8N4T4 335 aa15.59■□□□□ 0.09
PKD1-226ENST00000562425 MIEF2Q96C03 454 aa15.59■□□□□ 0.09
PKD1-226ENST00000562425 WDR34Q96EX3 536 aa15.59■□□□□ 0.09
PKD1-226ENST00000562425 PTCD3Q96EY7 689 aaKnown RBP15.59■□□□□ 0.09
PKD1-226ENST00000562425 VPS50Q96JG6 964 aa15.59■□□□□ 0.09
PKD1-226ENST00000562425 MRPL46Q9H2W6 279 aaKnown RBP15.59■□□□□ 0.09
PKD1-226ENST00000562425 MKKSQ9NPJ1 570 aaPredicted RBP15.59■□□□□ 0.09
PKD1-226ENST00000562425 ZNF358Q9NW07 568 aa15.59■□□□□ 0.09
PKD1-226ENST00000562425 GEMIN8Q9NWZ8 242 aaKnown RBP15.59■□□□□ 0.09
PKD1-226ENST00000562425 TRPC4Q9UBN4 977 aa15.59■□□□□ 0.09
PKD1-226ENST00000562425 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.59■□□□□ 0.097e-7■■□□□ 13
PKD1-226ENST00000562425 TBK1Q9UHD2 729 aa15.59■□□□□ 0.09
PKD1-226ENST00000562425 MAP4K5Q9Y4K4 846 aa15.59■□□□□ 0.09
PKD1-226ENST00000562425 KCNMB2Q9Y691 235 aa15.59■□□□□ 0.09
PKD1-226ENST00000562425 V9GYY5 206 aaPredicted RBP15.59■□□□□ 0.09
PKD1-226ENST00000562425 UBR5O95071 2799 aaPredicted RBP15.58■□□□□ 0.09
PKD1-226ENST00000562425 ANKDD1BA6NHY2 528 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 PEX12O00623 359 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 FOXS1O43638 330 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 FURINP09958 794 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 OTX2P32243 289 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 DEKP35659 375 aaKnown RBP15.58■□□□□ 0.08
PKD1-226ENST00000562425 AGTR2P50052 363 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 CHIT1Q13231 466 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 DOC2AQ14183 400 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 NAA30Q147X3 362 aaPredicted RBP15.58■□□□□ 0.08
PKD1-226ENST00000562425 PCBP2Q15366 365 aaKnown RBP eCLIP15.58■□□□□ 0.08
PKD1-226ENST00000562425 TBCCQ15814 346 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 LINC00303Q3SY05 128 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 ABHD13Q7L211 337 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 KCT2Q8NC54 265 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 NT5CQ8TCD5 201 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 STT3BQ8TCJ2 826 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 ADAMTS17Q8TE56 1095 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 AENQ8WTP8 325 aaKnown RBP15.58■□□□□ 0.08
PKD1-226ENST00000562425 UBE2E3Q969T4 207 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 MACROD1Q9BQ69 325 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 PARD6BQ9BYG5 372 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 ADNPQ9H2P0 1102 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 SPNS1Q9H2V7 528 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 C14orf105Q9NVL8 296 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 COPG2Q9UBF2 871 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 XPR1Q9UBH6 696 aa15.58■□□□□ 0.08
PKD1-226ENST00000562425 HEMK1Q9Y5R4 338 aaPredicted RBP15.58■□□□□ 0.08
PKD1-226ENST00000562425 MDC1Q14676 2089 aaKnown RBP15.58■□□□□ 0.08
PKD1-226ENST00000562425 IGLV3-12A0A075B6K2 115 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 VSTM2BA6NLU5 285 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 CNOT3O75175 753 aaKnown RBP15.57■□□□□ 0.08
PKD1-226ENST00000562425 CDH16O75309 829 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 SHBGP04278 402 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 SERPINA6P08185 405 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 GSTA1P08263 222 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 KRT15P19012 456 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 TAC1P20366 129 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 CASP2P42575 452 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 RRADP55042 308 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 POLE2P56282 527 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 STXBP1P61764 594 aaKnown RBP15.57■□□□□ 0.08
PKD1-226ENST00000562425 PCDH1Q08174 1060 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 MED25Q71SY5 747 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 APLFQ8IW19 511 aaPredicted RBP15.57■□□□□ 0.08
PKD1-226ENST00000562425 DTWD1Q8N5C7 304 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 TEX9Q8N6V9 391 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 PTGR2Q8N8N7 351 aaPredicted RBP15.57■□□□□ 0.08
PKD1-226ENST00000562425 TMEM102Q8N9M5 508 aaPredicted RBP15.57■□□□□ 0.08
PKD1-226ENST00000562425 ANKRD53Q8N9V6 530 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 OR9A4Q8NGU2 314 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 ZCCHC10Q8TBK6 192 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 CAVIN3Q969G5 261 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 SPSB2Q99619 263 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 SEMA3GQ9NS98 782 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 CTSFQ9UBX1 484 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 DCDC2Q9UHG0 476 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 TUBD1Q9UJT1 453 aa15.57■□□□□ 0.08
PKD1-226ENST00000562425 MRPS2Q9Y399 296 aaKnown RBP15.57■□□□□ 0.08
PKD1-226ENST00000562425 COL12A1Q99715 3063 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 STX16-NPEPL1H3BU86 382 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 STX16O14662 325 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 CLEC3AO75596 197 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 ZGLP1P0C6A0 271 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 PYGBP11216 843 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 ALOX12P18054 663 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 IL1RNP18510 177 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 MMP11P24347 488 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 SLCO1A2P46721 670 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 IFFO1Q0D2I5 559 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 FAM69BQ5VUD6 431 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 PRICKLE2Q7Z3G6 844 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 AMER3Q8N944 861 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 CCT6BQ92526 530 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 MOCOSQ96EN8 888 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 FER1L6-AS2Q96M78 137 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 CRB3Q9BUF7 120 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 TGIF2Q9GZN2 237 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 SLC6A16Q9GZN6 736 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 SOX17Q9H6I2 414 aaPredicted RBP15.56■□□□□ 0.08
PKD1-226ENST00000562425 CLK4Q9HAZ1 481 aaKnown RBP15.56■□□□□ 0.08
PKD1-226ENST00000562425 PRM3Q9NNZ6 103 aa15.56■□□□□ 0.08
PKD1-226ENST00000562425 ACSS2Q9NR19 701 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms