RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CASP10Q92851 521 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 CD101Q93033 1021 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 ATP6V0A1Q93050 837 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 EXT2Q93063 718 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 DHX58Q96C10 678 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 SPATA33Q96N06 139 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 FNBP1Q96RU3 617 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 RTP3Q9BQQ7 232 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 TRAF4Q9BUZ4 470 aaPredicted RBP3.47□□□□□ -1.85
HERC1-215ENST00000561436 PRRG4Q9BZD6 226 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 FN3KQ9H479 309 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 DCTPP1Q9H773 170 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 LRRC4Q9HBW1 653 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 ZBTB20Q9HC78 741 aaPredicted RBP3.47□□□□□ -1.85
HERC1-215ENST00000561436 XAB2Q9HCS7 855 aaKnown RBP3.47□□□□□ -1.85
HERC1-215ENST00000561436 MRGBPQ9NV56 204 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 ISY1Q9ULR0 285 aaKnown RBP3.47□□□□□ -1.85
HERC1-215ENST00000561436 SLC7A7Q9UM01 511 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 FAF1Q9UNN5 650 aaPredicted RBP3.47□□□□□ -1.85
HERC1-215ENST00000561436 MAST2Q6P0Q8 1798 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 NOTCH4Q99466 2003 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 MUC3AQ02505 3323 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 VCANP13611 3396 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 A0A087WV48 116 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 A0A1W2PPQ1 181 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 HTR3EA5X5Y0 456 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 PRR23AA6NEV1 266 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 NEMP2A6NFY4 417 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 PRAC2D3DTV9 90 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 M0QZ92 97 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 TULP2O00295 520 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 GAPDHSO14556 408 aaPredicted RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 BUB3O43684 328 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 STX6O43752 255 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 SYNCRIPO60506 623 aaKnown RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 RANBP6O60518 1105 aaKnown RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 CTSVO60911 334 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 PRDM1O75626 825 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 WISP2O76076 250 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 BAG4O95429 457 aaKnown RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 PPP1R3DO95685 299 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 VIMP08670 466 aaKnown RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 POLR2MP0CAP2 368 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 SMIM10L2AP0DMW4 78 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 SMIM10L2BP0DMW5 78 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 PDGFRAP16234 1089 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 AMD1P17707 334 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 GNAZP19086 355 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 CCND2P30279 289 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 HSD17B3P37058 310 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 MNDAP41218 407 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 LHX1P48742 406 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 ZNF132P52740 706 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 MAPK12P53778 367 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 GAS1P54826 345 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 RPL24P83731 157 aaKnown RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 MZT1Q08AG7 82 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 PRKAA1Q13131 559 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 PTK6Q13882 451 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 BTG3Q14201 252 aaPredicted RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 NONOQ15233 471 aaKnown RBP eCLIP3.46□□□□□ -1.86
HERC1-215ENST00000561436 UGCGQ16739 394 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 TCTE1Q5JU00 501 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 SPOUT1Q5T280 376 aaKnown RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 CCNYL2Q5T2Q4 361 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 STXBP5Q5T5C0 1151 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 CAVIN1Q6NZI2 390 aaKnown RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 DCLRE1AQ6PJP8 1040 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 GDPD4Q6W3E5 623 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 ZNF852Q6ZMS4 543 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 DNAJB7Q7Z6W7 309 aaPredicted RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 ZNF554Q86TJ5 538 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 NUDT13Q86X67 352 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 Q8NFD4 153 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 OR13A1Q8NGR1 328 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 C9orf43Q8TAL5 461 aaPredicted RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 ZNF473Q8WTR7 871 aaKnown RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 THOC1Q96FV9 657 aaKnown RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 OTUB1Q96FW1 271 aaPredicted RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 VMP1Q96GC9 406 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 CCDC114Q96M63 670 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 MUS81Q96NY9 551 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 INPP4AQ96PE3 977 aaPredicted RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 MYADMQ96S97 322 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 FEVQ99581 238 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 EPYCQ99645 322 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 CPNE1Q99829 537 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 GTPBP2Q9BX10 602 aaKnown RBP3.46□□□□□ -1.86
HERC1-215ENST00000561436 VN1R1Q9GZP7 353 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 S1PR5Q9H228 398 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 TLE6Q9H808 572 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 CDH20Q9HBT6 801 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 PXMP2Q9NR77 195 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 SERINC1Q9NRX5 453 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 ERAP1Q9NZ08 941 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 WWOXQ9NZC7 414 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 MTUS1Q9ULD2 1270 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 ZSWIM8A7E2V4 1837 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 UNC80Q8N2C7 3258 aa3.46□□□□□ -1.86
HERC1-215ENST00000561436 CCDC171Q6TFL3 1326 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms