RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 TMEM26Q6ZUK4 368 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 ASPGQ86U10 573 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 KLHDC8AQ8IYD2 350 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 CAMKVQ8NCB2 501 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 RBM15BQ8NDT2 890 aaKnown RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 OR9A4Q8NGU2 314 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 ADAMTS15Q8TE58 950 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 CCDC74AQ96AQ1 378 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 EME1Q96AY2 570 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 CNDP2Q96KP4 475 aaKnown RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 C3orf30Q96M34 536 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 C7orf26Q96N11 449 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 TRAPPC9Q96Q05 1148 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 LRRC61Q9BV99 259 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 EXO5Q9H790 373 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 ACTR5Q9H9F9 607 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 FETUBQ9UGM5 382 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 SLC6A14Q9UN76 642 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 ANGPT4Q9Y264 503 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 PCYT1BQ9Y5K3 369 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 SPTY2D1-AS1A0A0U1RR47 76 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 WASHC1A8K0Z3 465 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 TPD52L2O43399 206 aaKnown RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 NPHS1O60500 1241 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 ATP5HO75947 161 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 LDOC1O95751 146 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 LMNAP02545 664 aaKnown RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 CHRM5P08912 532 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 AVPR1BP47901 424 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 YPEL5P62699 121 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 TUBB3Q13509 450 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 SQLEQ14534 574 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 HEPACAMQ14CZ8 416 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 RCN1Q15293 331 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 SNCBQ16143 134 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 C6orf136Q5SQH8 315 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 WASH2PQ6VEQ5 465 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 ZNF551Q7Z340 670 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 PLXDC1Q8IUK5 500 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 ZNF547Q8IVP9 402 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 MICU2Q8IYU8 434 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 CPSF7Q8N684 471 aaKnown RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 MFSD2AQ8NA29 543 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 KDM1BQ8NB78 822 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 ZNF548Q8NEK5 533 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 DEFB124Q8NES8 71 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 GPR151Q8TDV0 419 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 RGMAQ96B86 450 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 NSMCE2Q96MF7 247 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 GABRG3Q99928 467 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 DUSP26Q9BV47 211 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 CCDC90BQ9GZT6 254 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 PCBD2Q9H0N5 130 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 PCDHAC1Q9H158 963 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 MAT2BQ9NZL9 334 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 IFT80Q9P2H3 777 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 NOTCH2Q04721 2471 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 A0A1W2PRB8 838 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 CDC14CA4D256 554 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 SIGLEC6O43699 453 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 DNAJA2O60884 412 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 JRKO75564 520 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 REM1O75628 298 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 CER1O95813 267 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 ENO2P09104 434 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 EBLN1P0CF75 366 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 HOXB3P14651 431 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 ENGP17813 658 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 AOC1P19801 751 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 NOVA1P51513 510 aaKnown RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 FOXL2P58012 376 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 KPNB1Q14974 876 aaKnown RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 GAB4Q2WGN9 574 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 RABL3Q5HYI8 236 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 GUSBP11Q6P575 273 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 ADAMTSL4Q6UY14 1074 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 SYNPOQ8N3V7 929 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 DTWD1Q8N5C7 304 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 SRFBP1Q8NEF9 429 aaKnown RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 OR52J3Q8NH60 311 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 PTCD3Q96EY7 689 aaKnown RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 CMTM7Q96FZ5 175 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 NUDT22Q9BRQ3 303 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 ZDHHC5Q9C0B5 715 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 GSTO2Q9H4Y5 243 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 LIN28AQ9H9Z2 209 aaKnown RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 EBF2Q9HAK2 575 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 TRNAU1APQ9NX07 287 aaKnown RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 NDE1Q9NXR1 346 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 SELENONQ9NZV5 590 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 LEF1Q9UJU2 399 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 RARRES3Q9UL19 164 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 TMPRSS11EQ9UL52 423 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 MKL2Q9ULH7 1088 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 RUVBL1Q9Y265 456 aaKnown RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 C9J4A7 227 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 SCN2BO60939 215 aa5.22□□□□□ -1.57
VPS13C-209ENST00000560637 DNAJC8O75937 253 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-209ENST00000560637 C6orf47O95873 294 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms