RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 COPEO14579 308 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 OR1F1O43749 312 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 NRP2O60462 931 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 WFS1O76024 890 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 LIFP15018 202 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 ALAS2P22557 587 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 ATP5F1P24539 256 aaPredicted RBP13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 PTPN4P29074 926 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 GMPRP36959 345 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 BCL6P41182 706 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 IRF8Q02556 426 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 HERC3Q15034 1050 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 NCF4Q15080 339 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 NKAIN1Q4KMZ8 207 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 GKAP1Q5VSY0 366 aaPredicted RBP13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 VN1R4Q7Z5H5 301 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 TMEM151AQ8N4L1 468 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 REPS1Q96D71 796 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 PAIP2Q9BPZ3 127 aaKnown RBP13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 WDR54Q9H977 334 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 FGFR1OP2Q9NVK5 253 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 ZNF358Q9NW07 568 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 GEMIN8Q9NWZ8 242 aaKnown RBP13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 TMEM216Q9P0N5 145 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 IFT80Q9P2H3 777 aaPredicted RBP13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 DHCR7Q9UBM7 475 aaKnown RBP13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 NDOR1Q9UHB4 597 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 GPN3Q9UHW5 284 aaPredicted RBP13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 RUVBL1Q9Y265 456 aaKnown RBP13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 FARSAQ9Y285 508 aaKnown RBP13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 PLLPQ9Y342 182 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 MAP1BP46821 2468 aaKnown RBP13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 DMXL2Q8TDJ6 3036 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 TEX51A0A1B0GUA7 166 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 E2F3O00716 465 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 PCDH17O14917 1159 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 EFSO43281 561 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 NSA2O95478 260 aaKnown RBP13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 SERPINA6P08185 405 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 CYC1P08574 325 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 SPTBP11277 2137 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 ITGAXP20702 1163 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 ITPKBP27987 946 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 AVPR1BP47901 424 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 HERVK_113P63132 956 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 XKR6Q5GH73 641 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 PRAMEF17Q5VTA0 474 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 CGB2Q6NT52 195 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 TMEM214Q6NUQ4 689 aaKnown RBP13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 ABHD13Q7L211 337 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 ARHGEF39Q8N4T4 335 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 PTGR2Q8N8N7 351 aaPredicted RBP13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 CT55Q8WUE5 264 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 STARD8Q92502 1023 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 IP6K3Q96PC2 410 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 ERVK-6Q9BXR3 956 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 IQCGQ9H095 443 aaKnown RBP13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 NSRP1Q9H0G5 558 aaKnown RBP13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 CHST8Q9H2A9 424 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 ZNF304Q9HCX3 659 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 PCDHGA11Q9Y5H2 935 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 SEC16AO15027 2179 aa13.31□□□□□ -0.28
PKNOX1-209ENST00000560448 A0A088AWK7 358 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 FEZF1A0PJY2 475 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 ANKDD1BA6NHY2 528 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 NDUFS4O43181 175 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 LCMT2O60294 686 aaKnown RBP13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 SNX3O60493 162 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 CLEC3AO75596 197 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 ITGB2P05107 769 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 ZNF10P21506 573 aaPredicted RBP13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 IL10P22301 178 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 STXBP1P61764 594 aaKnown RBP13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 PHEXP78562 749 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 CHIT1Q13231 466 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 GTF2H2Q13888 395 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 DSG2Q14126 1118 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 DOC2AQ14183 400 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 SLBPQ14493 270 aaKnown RBP eCLIP13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 HKDC1Q2TB90 917 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 C18orf21Q32NC0 220 aaPredicted RBP13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 GRHL2Q6ISB3 625 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 GTF2H2CQ6P1K8 395 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 MRPL14Q6P1L8 145 aaKnown RBP13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 MED27Q6P2C8 311 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 FAM198BQ6UWH4 519 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 OVCH1Q7RTY7 1134 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 GPR155Q7Z3F1 870 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 PLD3Q8IV08 490 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 TEX9Q8N6V9 391 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 SRFBP1Q8NEF9 429 aaKnown RBP13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 THAP4Q8WY91 577 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 ZNF75CPQ92670 426 aaPredicted RBP13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 ESAMQ96AP7 390 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 PHF21BQ96EK2 531 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 VPS50Q96JG6 964 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 C10orf90Q96M02 699 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 FAM111AQ96PZ2 611 aa13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 ELAC2Q9BQ52 826 aaKnown RBP13.3□□□□□ -0.28
PKNOX1-209ENST00000560448 NTMT1Q9BV86 223 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms