RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 C5orf24Q7Z6I8 188 aa4.87□□□□□ -1.63
MARK3-220ENST00000560417 SPC24Q8NBT2 197 aa4.87□□□□□ -1.63
MARK3-220ENST00000560417 OR4C15Q8NGM1 316 aa4.87□□□□□ -1.63
MARK3-220ENST00000560417 AZIN2Q96A70 460 aa4.87□□□□□ -1.63
MARK3-220ENST00000560417 CDKN2AIPNLQ96HQ2 116 aa4.87□□□□□ -1.63
MARK3-220ENST00000560417 CCDC43Q96MW1 224 aaKnown RBP4.87□□□□□ -1.63
MARK3-220ENST00000560417 OSBPL8Q9BZF1 889 aa4.87□□□□□ -1.63
MARK3-220ENST00000560417 PDRG1Q9NUG6 133 aa4.87□□□□□ -1.63
MARK3-220ENST00000560417 TMEM181Q9P2C4 612 aa4.87□□□□□ -1.63
MARK3-220ENST00000560417 EPHA6Q9UF33 1036 aa4.87□□□□□ -1.63
MARK3-220ENST00000560417 SLC12A6Q9UHW9 1150 aa4.87□□□□□ -1.63
MARK3-220ENST00000560417 STX8Q9UNK0 236 aa4.87□□□□□ -1.63
MARK3-220ENST00000560417 A0A087X0K7 114 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 TRBV4-1A0A0J9YWV2 114 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 FAM149AA5PLN7 773 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 TRIM64A6NGJ6 449 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 TRIM64BA6NI03 449 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 E5RGE8 158 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 IKBKBO14920 756 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 KIF5CO60282 957 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 SAP30O75446 220 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 HMBSP08397 361 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 CFC1BP0CG36 223 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 CFC1P0CG37 223 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 RPL35AP18077 110 aaKnown RBP4.86□□□□□ -1.63
MARK3-220ENST00000560417 ELAVL4P26378 380 aaKnown RBP4.86□□□□□ -1.63
MARK3-220ENST00000560417 SRD5A2P31213 254 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 NME5P56597 212 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 DCDC1P59894 354 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 PRAMEF8Q5VWM4 474 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 KCTD11Q693B1 232 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 SFRP1Q8N474 314 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 LPCAT1Q8NF37 534 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 GPRC5AQ8NFJ5 357 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 DNASE2BQ8WZ79 361 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 AP2M1Q96CW1 435 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 NXPE2Q96DL1 559 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 NKX3-1Q99801 234 aaPredicted RBP4.86□□□□□ -1.63
MARK3-220ENST00000560417 FSD1Q9BTV5 496 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 FUCA2Q9BTY2 467 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 IDI2Q9BXS1 227 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 SLC39A8Q9C0K1 460 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 ZNF696Q9H7X3 374 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 EXOC1Q9NV70 894 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 TRPC4Q9UBN4 977 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 NSG2Q9Y328 171 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 PYGO1Q9Y3Y4 419 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 LAMC3Q9Y6N6 1575 aa4.86□□□□□ -1.63
MARK3-220ENST00000560417 A0A087X002 238 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 HHLA1C9JL84 531 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 PGRMC2O15173 223 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 CRCPO75575 148 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 CTNNB1P35222 781 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 LBX1P52954 281 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 FKBP1BP68106 108 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 TEFQ10587 303 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 ABRQ12979 859 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 SGCGQ13326 291 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 EFTUD2Q15029 972 aaKnown RBP eCLIP4.85□□□□□ -1.632e-10■□□□□ 11.2
MARK3-220ENST00000560417 SIGLEC15Q6ZMC9 328 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 ASPGQ86U10 573 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 CNTN4Q8IWV2 1026 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 ZC3H3Q8IXZ2 948 aaKnown RBP4.85□□□□□ -1.63
MARK3-220ENST00000560417 TMEM99Q8N816 258 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 LRR1Q96L50 414 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 NECTIN4Q96NY8 510 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 LITAFQ99732 161 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 TDRD1Q9BXT4 1180 aaKnown RBP4.85□□□□□ -1.63
MARK3-220ENST00000560417 KRTAP1-5Q9BYS1 174 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 FBXW2Q9UKT8 454 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 CCDC88BA6NC98 1476 aa4.85□□□□□ -1.63
MARK3-220ENST00000560417 NPHP3Q7Z494 1330 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 MAGEB16A2A368 324 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 GTPBP10A4D1E9 387 aaKnown RBP4.84□□□□□ -1.63
MARK3-220ENST00000560417 C5orf51A6NDU8 294 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 DDX39AO00148 427 aaKnown RBP4.84□□□□□ -1.63
MARK3-220ENST00000560417 CYTIPO60759 359 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 OLFM2O95897 454 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 PNPP00491 289 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 SOX3P41225 446 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 SERPINH1P50454 418 aaKnown RBP4.84□□□□□ -1.63
MARK3-220ENST00000560417 CLCN4P51793 760 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 GUCY2DQ02846 1103 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 UBXN1Q04323 297 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 RPA4Q13156 261 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 TMEM132DQ14C87 1099 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 PPA1Q15181 289 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 HFEQ30201 348 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 ARMCX4Q5H9R4 360 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 PRSS42Q7Z5A4 293 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 DDHD1Q8NEL9 900 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 CD99L2Q8TCZ2 262 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 RNASE8Q8TDE3 154 aaKnown RBP4.84□□□□□ -1.63
MARK3-220ENST00000560417 FBXO17Q96EF6 278 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 GMPPAQ96IJ6 420 aaPredicted RBP4.84□□□□□ -1.63
MARK3-220ENST00000560417 FAM218AQ96MZ4 157 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 ATP6V0BQ99437 205 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 CUEDC2Q9H467 287 aa4.84□□□□□ -1.63
MARK3-220ENST00000560417 RPF1Q9H9Y2 349 aaKnown RBP4.84□□□□□ -1.63
MARK3-220ENST00000560417 DNAJC11Q9NVH1 559 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms