RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 NAALAD2Q9Y3Q0 740 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 RP1L1Q8IWN7 2480 aaPredicted RBP11.92□□□□□ -0.5
LRRC28-214ENST00000559433 NSG1A0A0A6YYJ2 146 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 ZNF860A6NHJ4 632 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 PCDH17O14917 1159 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 JRKO75564 520 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 SORBS2O94875 1100 aaKnown RBP11.91□□□□□ -0.5
LRRC28-214ENST00000559433 KLHL18O94889 574 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 BMP10O95393 424 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 S100BP04271 92 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-214ENST00000559433 SLC35E2BP0CK96 405 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 COX6A1P12074 109 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 GNAZP19086 355 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 PHBP35232 272 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 AHRP35869 848 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 GDF5P43026 501 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 XCR1P46094 333 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 SCTRP47872 440 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 SLC6A12P48065 614 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 GLRBP48167 497 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 Q0VFX4 171 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 UBAP2LQ14157 1087 aaKnown RBP11.91□□□□□ -0.5
LRRC28-214ENST00000559433 HERC3Q15034 1050 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 RBBP5Q15291 538 aaKnown RBP11.91□□□□□ -0.5
LRRC28-214ENST00000559433 INPP5JQ15735 1006 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-214ENST00000559433 CEP128Q6ZU80 1094 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 NDUFAF7Q7L592 441 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 TBC1D1Q86TI0 1168 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-214ENST00000559433 KBTBD2Q8IY47 623 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 KLHDC8AQ8IYD2 350 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 IQCKQ8N0W5 287 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 GALNT11Q8NCW6 608 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 OR51Q1Q8NH59 317 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 NT5CQ8TCD5 201 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 IFT81Q8WYA0 676 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 MRRFQ96E11 262 aaKnown RBP11.91□□□□□ -0.5
LRRC28-214ENST00000559433 UBXN10Q96LJ8 280 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 TMEM79Q9BSE2 394 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 EPS8L2Q9H6S3 715 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 CNOT10Q9H9A5 744 aaKnown RBP11.91□□□□□ -0.5
LRRC28-214ENST00000559433 NINJ2Q9NZG7 142 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 CD274Q9NZQ7 290 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 RNF112Q9ULX5 631 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 SLC22A7Q9Y694 548 aa11.91□□□□□ -0.5
LRRC28-214ENST00000559433 IGHV1-45A0A0A0MS14 117 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 WFS1O76024 890 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 ZNF888P0CJ79 500 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-214ENST00000559433 C8orf89P0DMQ9 161 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 ICAM2P13598 275 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 CRABP2P29373 138 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 GMPRP36959 345 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 HSPA7P48741 367 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 AP2B1P63010 937 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 SKP1P63208 163 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 CDC16Q13042 620 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 BMPR2Q13873 1038 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 UAP1Q16222 522 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-214ENST00000559433 PLEKHN1Q494U1 663 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-214ENST00000559433 DEFB134Q4QY38 66 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 FBXO48Q5FWF7 155 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 SULT1C3Q6IMI6 304 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 IGFL3Q6UXB1 125 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 ABHD13Q7L211 337 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 CPAMD8Q8IZJ3 1885 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 SHISA5Q8N114 240 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 AFAP1L2Q8N4X5 818 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 SNX31Q8N9S9 440 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 ANKRD53Q8N9V6 530 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 Q8NA96 180 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 TRPV3Q8NET8 790 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 KIF18AQ8NI77 898 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 DNAJB14Q8TBM8 379 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 KIAA1191Q96A73 305 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 TRIM44Q96DX7 344 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-214ENST00000559433 CYTH2Q99418 400 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 RBCK1Q9BYM8 510 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 VN1R1Q9GZP7 353 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 ALG9Q9H6U8 611 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 NMRAL1Q9HBL8 299 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 ZBTB20Q9HC78 741 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-214ENST00000559433 PRM3Q9NNZ6 103 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 RIC8BQ9NVN3 520 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 DMGDHQ9UI17 866 aaKnown RBP11.9□□□□□ -0.5
LRRC28-214ENST00000559433 BOLA1Q9Y3E2 137 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 SHANK1Q9Y566 2161 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 FLNCQ14315 2725 aa11.9□□□□□ -0.5
LRRC28-214ENST00000559433 COL12A1Q99715 3063 aa11.9□□□□□ -0.51
LRRC28-214ENST00000559433 LOC102723996A0A087X1L8 192 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 A0A1W2PQ72 361 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 URADA6NGE7 173 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 SUPT3HB4E1H0 165 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 TAPBPO15533 448 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 GALR3O60755 368 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-214ENST00000559433 H2AFYO75367 372 aaKnown RBP11.89□□□□□ -0.51
LRRC28-214ENST00000559433 SUPT3HO75486 399 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 STK16O75716 305 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 CYC1P08574 325 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 LTA4HP09960 611 aaKnown RBP11.89□□□□□ -0.51
LRRC28-214ENST00000559433 C1GALT1C1LP0DN25 315 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 ALOX12P18054 663 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms