RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 GBP7Q8N8V2 638 aaPredicted RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 LRTM2Q8N967 370 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 SLC37A3Q8NCC5 494 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 SLC24A4Q8NFF2 622 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 DMBX1Q8NFW5 382 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 OR7A2PQ8NGA2 310 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 OR13A1Q8NGR1 328 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 OR52N5Q8NH56 324 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 ELP5Q8TE02 316 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 GANCQ8TET4 914 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 HSD17B8Q92506 261 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 PHF21BQ96EK2 531 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF274Q96GC6 653 aaPredicted RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 IGSF21Q96ID5 467 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 EPSTI1Q96J88 318 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 CXorf58Q96LI9 332 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 C17orf77Q96MU5 243 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 TSGA13Q96PP4 275 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 PRMT1Q99873 361 aaKnown RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 THUMPD2Q9BTF0 503 aaKnown RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 CARD6Q9BX69 1037 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 OR2B2Q9GZK3 357 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 NACA2Q9H009 215 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 TSPYL1Q9H0U9 437 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 TMEM245Q9H330 911 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 TMEM231Q9H6L2 316 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 ZBTB20Q9HC78 741 aaPredicted RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 KCNMB3Q9NPA1 279 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 MRPL17Q9NRX2 175 aaKnown RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 HOMER3Q9NSC5 361 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 PNPLA3Q9NST1 481 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 PIGVQ9NUD9 493 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 EXOC1Q9NV70 894 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 SOHLH2Q9NX45 425 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 RNF186Q9NXI6 227 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 CGNQ9P2M7 1197 aaKnown RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 ANKMY1Q9P2S6 941 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 TRIM10Q9UDY6 481 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 TBK1Q9UHD2 729 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 TEKT2Q9UIF3 430 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 DNPEPQ9ULA0 475 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 ATP6V0A2Q9Y487 856 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 IL16Q14005 1332 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 DHX29Q7Z478 1369 aaKnown RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 DNAJC9-AS1A6NH13 148 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 A8MVM7 634 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 LACTBL1A8MY62 500 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 C16orf97H3BN30 126 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 FPGTO14772 594 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 OGTO15294 1046 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 B4GAT1O43505 415 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 KIF5CO60282 957 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ZBTB11O95625 1053 aaPredicted RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 DIRAS3O95661 229 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 CXCL14O95715 111 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 TOMM40O96008 361 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 PDGFBP01127 241 aaPredicted RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 CALCAP01258 141 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 RAF1P04049 648 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ATP1A1P05023 1023 aaKnown RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ATP1B1P05026 303 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 YES1P07947 543 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 SFTPBP07988 381 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 MMP10P09238 476 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 FAM200BP0CF97 657 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 SKILP12757 684 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 B4GALT1P15291 398 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 EFNA1P20827 205 aaPredicted RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 DGKAP23743 735 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ACP1P24666 158 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 CTNNA2P26232 953 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ELAVL4P26378 380 aaKnown RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 CCND2P30279 289 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 HLA-FP30511 346 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 PKLRP30613 574 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 AKT2P31751 481 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 CDKN2AP42771 156 aaKnown RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 IFNAR2P48551 515 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF132P52740 706 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 PITX1P78337 314 aaPredicted RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 CDR2Q01850 454 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 LTBQ06643 244 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 GAGE5Q13069 117 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 GAGE6Q13070 117 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 SCGB2A2Q13296 93 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ITGA9Q13797 1035 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 GK2Q14410 553 aaPredicted RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 RBM39Q14498 530 aaKnown RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 TWIST1Q15672 202 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 STX1AQ16623 288 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 IZUMO4Q1ZYL8 232 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ANKDD1AQ495B1 522 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 GPR33Q49SQ1 333 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 CMPK2Q5EBM0 449 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 SLC25A53Q5H9E4 307 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ARHGEF16Q5VV41 709 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 LYPLAL1Q5VWZ2 237 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 SNRNP48Q6IEG0 339 aaKnown RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 OR4C11Q6IEV9 310 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF770Q6IQ21 691 aaPredicted RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms