RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 TTC29Q8NA56 475 aaPredicted RBP7.01□□□□□ -1.29
SPG11-213ENST00000558988 LINC01555Q8NAE3 123 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 CLEC1AQ8NC01 280 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 C19orf60Q96EN9 201 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 FOPNLQ96NB1 174 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 GBP5Q96PP8 586 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 PANX3Q96QZ0 392 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 C17orf62Q9BQA9 187 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 CARD6Q9BX69 1037 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 IL22Q9GZX6 179 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 ILKAPQ9H0C8 392 aaPredicted RBP7.01□□□□□ -1.29
SPG11-213ENST00000558988 INTS7Q9NVH2 962 aaKnown RBP7.01□□□□□ -1.29
SPG11-213ENST00000558988 P4HTMQ9NXG6 502 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 SAMD15Q9P1V8 674 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 FBXL4Q9UKA2 621 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 PCDHGA9Q9Y5G4 932 aaKnown RBP7.01□□□□□ -1.29
SPG11-213ENST00000558988 HECTD1Q9ULT8 2610 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 SETXQ7Z333 2677 aaKnown RBP7.01□□□□□ -1.29
SPG11-213ENST00000558988 SMG1Q96Q15 3661 aaKnown RBP7□□□□□ -1.29
SPG11-213ENST00000558988 A0A1B0GX78 115 aa7□□□□□ -1.29
SPG11-213ENST00000558988 E5RI56 91 aa7□□□□□ -1.29
SPG11-213ENST00000558988 RASGRF2O14827 1237 aa7□□□□□ -1.29
SPG11-213ENST00000558988 GPC4O75487 556 aa7□□□□□ -1.29
SPG11-213ENST00000558988 ATE1O95260 518 aa7□□□□□ -1.29
SPG11-213ENST00000558988 SYF2O95926 243 aaKnown RBP7□□□□□ -1.29
SPG11-213ENST00000558988 STATHP02808 62 aa7□□□□□ -1.29
SPG11-213ENST00000558988 ALPPP05187 535 aa7□□□□□ -1.29
SPG11-213ENST00000558988 CD3EP07766 207 aa7□□□□□ -1.29
SPG11-213ENST00000558988 ERVK-10P10266 1014 aa7□□□□□ -1.29
SPG11-213ENST00000558988 PSMA3P25788 255 aa7□□□□□ -1.29
SPG11-213ENST00000558988 NPY2RP49146 381 aa7□□□□□ -1.29
SPG11-213ENST00000558988 KRTAP10-7P60409 375 aaPredicted RBP7□□□□□ -1.29
SPG11-213ENST00000558988 SRSF1Q07955 248 aaKnown RBP eCLIP7□□□□□ -1.29
SPG11-213ENST00000558988 CUL1Q13616 776 aa7□□□□□ -1.29
SPG11-213ENST00000558988 FASTKQ14296 549 aaKnown RBP7□□□□□ -1.29
SPG11-213ENST00000558988 GRB7Q14451 532 aa7□□□□□ -1.29
SPG11-213ENST00000558988 RBBP7Q16576 425 aa7□□□□□ -1.29
SPG11-213ENST00000558988 EIF2S3LQ2VIR3 472 aaKnown RBP7□□□□□ -1.29
SPG11-213ENST00000558988 ZC3H12BQ5HYM0 836 aaKnown RBP7□□□□□ -1.29
SPG11-213ENST00000558988 CTSL3PQ5NE16 218 aa7□□□□□ -1.29
SPG11-213ENST00000558988 DCAF10Q5QP82 559 aa7□□□□□ -1.29
SPG11-213ENST00000558988 FHL5Q5TD97 284 aa7□□□□□ -1.29
SPG11-213ENST00000558988 VWA5B1Q5TIE3 1220 aa7□□□□□ -1.29
SPG11-213ENST00000558988 IRAK1BP1Q5VVH5 260 aa7□□□□□ -1.29
SPG11-213ENST00000558988 ANKRD22Q5VYY1 191 aa7□□□□□ -1.29
SPG11-213ENST00000558988 FBXW10Q5XX13 1052 aa7□□□□□ -1.29
SPG11-213ENST00000558988 FCRL6Q6DN72 434 aa7□□□□□ -1.29
SPG11-213ENST00000558988 ZNF470Q6ECI4 717 aa7□□□□□ -1.29
SPG11-213ENST00000558988 MRNIPQ6NTE8 343 aa7□□□□□ -1.29
SPG11-213ENST00000558988 SUSD1Q6UWL2 747 aa7□□□□□ -1.29
SPG11-213ENST00000558988 PPP1R32Q7Z5V6 425 aa7□□□□□ -1.29
SPG11-213ENST00000558988 ADCK2Q7Z695 626 aa7□□□□□ -1.29
SPG11-213ENST00000558988 SDCCAG8Q86SQ7 713 aaPredicted RBP7□□□□□ -1.29
SPG11-213ENST00000558988 MPP5Q8N3R9 675 aa7□□□□□ -1.29
SPG11-213ENST00000558988 GALNT16Q8N428 558 aa7□□□□□ -1.29
SPG11-213ENST00000558988 CISD2Q8N5K1 135 aaKnown RBP7□□□□□ -1.29
SPG11-213ENST00000558988 RBMXL3Q8N7X1 1067 aaKnown RBP7□□□□□ -1.29
SPG11-213ENST00000558988 OR2Y1Q8NGV0 311 aa7□□□□□ -1.29
SPG11-213ENST00000558988 OR2L8Q8NGY9 312 aa7□□□□□ -1.29
SPG11-213ENST00000558988 PROKR1Q8TCW9 393 aa7□□□□□ -1.29
SPG11-213ENST00000558988 MAIP1Q8WWC4 291 aa7□□□□□ -1.29
SPG11-213ENST00000558988 DLG3Q92796 817 aa7□□□□□ -1.29
SPG11-213ENST00000558988 SLC22A18Q96BI1 424 aa7□□□□□ -1.29
SPG11-213ENST00000558988 ZNF669Q96BR6 464 aaPredicted RBP7□□□□□ -1.29
SPG11-213ENST00000558988 CNDP1Q96KN2 507 aa7□□□□□ -1.29
SPG11-213ENST00000558988 FER1L6-AS2Q96M78 137 aa7□□□□□ -1.29
SPG11-213ENST00000558988 DHRS4Q9BTZ2 278 aa7□□□□□ -1.29
SPG11-213ENST00000558988 RAB11FIP5Q9BXF6 653 aa7□□□□□ -1.29
SPG11-213ENST00000558988 EIF2B3Q9NR50 452 aaKnown RBP7□□□□□ -1.29
SPG11-213ENST00000558988 TREX1Q9NSU2 369 aa7□□□□□ -1.29
SPG11-213ENST00000558988 CUTCQ9NTM9 273 aa7□□□□□ -1.29
SPG11-213ENST00000558988 CTSFQ9UBX1 484 aa7□□□□□ -1.29
SPG11-213ENST00000558988 RIMKLBQ9ULI2 386 aa7□□□□□ -1.29
SPG11-213ENST00000558988 FAM169AQ9Y6X4 670 aa7□□□□□ -1.29
SPG11-213ENST00000558988 LOC105369274A0A096LPK9 316 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 LOC102723532A0A0G2JNH3 316 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 CTAGE9A4FU28 777 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 TCP11X1B4DZS4 312 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 H3BMH7 237 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 DSCR3O14972 297 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 KPNA5O15131 536 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 PFDN6O15212 129 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 CTSVO60911 334 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 CEACAM4O75871 244 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 SORBS2O94875 1100 aaKnown RBP6.99□□□□□ -1.29
SPG11-213ENST00000558988 SLCO2B1O94956 709 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 C1orf105O95561 183 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 KRT14P02533 472 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 UMODP07911 640 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 PAMP19021 973 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 ITGAXP20702 1163 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 RPA3P35244 121 aaPredicted RBP6.99□□□□□ -1.29
SPG11-213ENST00000558988 GLRBP48167 497 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 ARSFP54793 590 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 THOC5Q13769 683 aaKnown RBP6.99□□□□□ -1.29
SPG11-213ENST00000558988 DHX34Q14147 1143 aaKnown RBP6.99□□□□□ -1.29
SPG11-213ENST00000558988 GRM7Q14831 915 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 KLHL38Q2WGJ6 581 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 ACSBG2Q5FVE4 666 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 WASHC2DQ5SRD0 308 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms